Project name: 4-5R3

Status: done

Started: 2025-02-21 02:07:25
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Chain sequence(s) A: MTEQQWNFAGIEAAASAIQGNVTSIHSLLDEGKQSLTKLAAAWGGSGSEAYQGVQQKWDATATELNNALQNLARTISEAGQAMASTEGNVTGMFAFAVTNDGVI
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:55)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:56)
Show buried residues

Minimal score value
-2.9353
Maximal score value
3.1519
Average score
-0.9902
Total score value
-102.9771

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.3158
2 T A -1.0465
3 E A -2.3703
4 Q A -2.3339
5 Q A -2.1400
6 W A -0.4445
7 N A -1.1747
8 F A -0.4162
9 A A -0.4605
10 G A -0.5548
11 I A -0.3362
12 E A -1.6867
13 A A -0.8294
14 A A -0.3383
15 A A -0.8791
16 S A -0.9253
17 A A -0.6516
18 I A -0.4266
19 Q A -1.3101
20 G A -1.1938
21 N A -1.4861
22 V A -0.7972
23 T A -0.8152
24 S A -0.5403
25 I A -0.3568
26 H A -1.1212
27 S A -0.8326
28 L A 0.0586
29 L A -0.9908
30 D A -2.4299
31 E A -2.5946
32 G A -1.8927
33 K A -2.0726
34 Q A -2.5356
35 S A -1.8760
36 L A -1.0783
37 T A -1.3833
38 K A -1.5673
39 L A -0.0746
40 A A -0.3097
41 A A -0.1786
42 A A 0.0842
43 W A 0.2127
44 G A -0.4164
45 G A -0.9267
46 S A -0.8907
47 G A -1.0273
48 S A -1.4784
49 E A -2.3184
50 A A -1.1698
51 Y A -1.0160
52 Q A -2.1989
53 G A -1.6543
54 V A -0.8212
55 Q A -1.6178
56 Q A -2.3241
57 K A -2.3127
58 W A -1.4643
59 D A -1.8469
60 A A -1.5519
61 T A -1.5025
62 A A -1.4060
63 T A -1.6536
64 E A -2.2995
65 L A -1.3341
66 N A -1.7976
67 N A -2.4882
68 A A -1.7127
69 L A -1.7259
70 Q A -2.6600
71 N A -2.4040
72 L A -1.2397
73 A A -1.8249
74 R A -2.9353
75 T A -1.8986
76 I A -1.5472
77 S A -2.2800
78 E A -2.6505
79 A A -1.5838
80 G A -1.6089
81 Q A -2.1868
82 A A -1.2186
83 M A -0.9154
84 A A -1.4264
85 S A -1.3797
86 T A -1.5141
87 E A -2.3202
88 G A -1.8413
89 N A -1.5420
90 V A 0.0042
91 T A 0.2086
92 G A 0.4308
93 M A 2.0338
94 F A 3.1519
95 A A 2.3341
96 F A 2.7472
97 A A 1.6396
98 V A 2.1397
99 T A 0.9758
100 N A -0.7195
101 D A -1.0050
102 G A 0.1414
103 V A 2.1615
104 I A 2.4927
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Laboratory of Theory of Biopolymers 2018