| Chain sequence(s) |
A: SCGGSCFGGCWPGCSCYARTCFRDGLP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:05)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -0.0169 | |
| 2 | C | A | 0.3985 | |
| 3 | G | A | -0.0064 | |
| 4 | G | A | -0.0405 | |
| 5 | S | A | 0.0812 | |
| 6 | C | A | 0.7092 | |
| 7 | F | A | 1.4257 | |
| 8 | G | A | 0.4105 | |
| 9 | G | A | 0.1607 | |
| 10 | C | A | 0.6732 | |
| 11 | W | A | 0.8446 | |
| 12 | P | A | -0.0276 | |
| 13 | G | A | -0.1325 | |
| 14 | C | A | 0.1548 | |
| 15 | S | A | 0.5917 | |
| 16 | C | A | 1.2501 | |
| 17 | Y | A | 1.3108 | |
| 18 | A | A | 0.1581 | |
| 19 | R | A | -0.8231 | |
| 20 | T | A | 0.1062 | |
| 21 | C | A | 0.0000 | |
| 22 | F | A | 0.9278 | |
| 23 | R | A | -0.9076 | |
| 24 | D | A | -2.0339 | |
| 25 | G | A | -1.1533 | |
| 26 | L | A | -0.3123 | |
| 27 | P | A | -0.3469 |