Project name: query_structure

Status: done

Started: 2026-03-16 23:03:49
Settings
Chain sequence(s) A: DKLIGSCVWGAVNYTSNCNAECKRRGYKGGHCGSFANVNCWCET
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:18)
Show buried residues

Minimal score value
-4.1987
Maximal score value
1.6462
Average score
-0.756
Total score value
-33.265

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.6273
2 K A -1.8335
3 L A -0.2624
4 I A -0.1266
5 G A 0.0000
6 S A 0.0000
7 C A 0.4035
8 V A 1.3773
9 W A 1.6462
10 G A 0.7415
11 A A 1.0761
12 V A 1.4769
13 N A -0.0121
14 Y A 0.6330
15 T A -0.1675
16 S A -0.5912
17 N A -1.8975
18 C A 0.0000
19 N A -2.7818
20 A A -2.6119
21 E A 0.0000
22 C A 0.0000
23 K A -4.1987
24 R A -3.7779
25 R A -3.0963
26 G A -2.6081
27 Y A -2.7740
28 K A -3.1473
29 G A 0.0000
30 G A -2.3290
31 H A -1.6574
32 C A -0.3972
33 G A -0.3460
34 S A 0.3965
35 F A 1.4822
36 A A 0.5398
37 N A -0.4007
38 V A 0.6964
39 N A 0.1085
40 C A 0.0000
41 W A -1.2357
42 C A 0.0000
43 E A -3.1150
44 T A -1.8478
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Laboratory of Theory of Biopolymers 2018