| Chain sequence(s) |
A: DKLIGSCVWGAVNYTSNCNAECKRRGYKGGHCGSFANVNCWCET
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:18)
[INFO] Main: Simulation completed successfully. (00:00:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.6273 | |
| 2 | K | A | -1.8335 | |
| 3 | L | A | -0.2624 | |
| 4 | I | A | -0.1266 | |
| 5 | G | A | 0.0000 | |
| 6 | S | A | 0.0000 | |
| 7 | C | A | 0.4035 | |
| 8 | V | A | 1.3773 | |
| 9 | W | A | 1.6462 | |
| 10 | G | A | 0.7415 | |
| 11 | A | A | 1.0761 | |
| 12 | V | A | 1.4769 | |
| 13 | N | A | -0.0121 | |
| 14 | Y | A | 0.6330 | |
| 15 | T | A | -0.1675 | |
| 16 | S | A | -0.5912 | |
| 17 | N | A | -1.8975 | |
| 18 | C | A | 0.0000 | |
| 19 | N | A | -2.7818 | |
| 20 | A | A | -2.6119 | |
| 21 | E | A | 0.0000 | |
| 22 | C | A | 0.0000 | |
| 23 | K | A | -4.1987 | |
| 24 | R | A | -3.7779 | |
| 25 | R | A | -3.0963 | |
| 26 | G | A | -2.6081 | |
| 27 | Y | A | -2.7740 | |
| 28 | K | A | -3.1473 | |
| 29 | G | A | 0.0000 | |
| 30 | G | A | -2.3290 | |
| 31 | H | A | -1.6574 | |
| 32 | C | A | -0.3972 | |
| 33 | G | A | -0.3460 | |
| 34 | S | A | 0.3965 | |
| 35 | F | A | 1.4822 | |
| 36 | A | A | 0.5398 | |
| 37 | N | A | -0.4007 | |
| 38 | V | A | 0.6964 | |
| 39 | N | A | 0.1085 | |
| 40 | C | A | 0.0000 | |
| 41 | W | A | -1.2357 | |
| 42 | C | A | 0.0000 | |
| 43 | E | A | -3.1150 | |
| 44 | T | A | -1.8478 |