| Chain sequence(s) |
A: EVQLVESGGGSVQAGGSLRLSCAVSGYTYCSYDMSWYRQAPGKEREFVSGIDSDGSTSYADSVKGRFTISQDNAKNTLYLQMNSLKPEDTAMYYCAVDSVWRLCSLDPADFGYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:58)
[INFO] Main: Simulation completed successfully. (00:03:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.9977 | |
| 2 | V | A | -1.1155 | |
| 3 | Q | A | -1.2921 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.3280 | |
| 6 | E | A | -0.3578 | |
| 7 | S | A | -0.7213 | |
| 8 | G | A | -1.2651 | |
| 9 | G | A | -1.2329 | |
| 10 | G | A | -0.9301 | |
| 11 | S | A | -0.7072 | |
| 12 | V | A | -0.7547 | |
| 13 | Q | A | -1.5937 | |
| 14 | A | A | -1.6285 | |
| 15 | G | A | -1.3435 | |
| 16 | G | A | -1.0822 | |
| 17 | S | A | -1.2463 | |
| 18 | L | A | -1.1771 | |
| 19 | R | A | -2.1630 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.5565 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.3192 | |
| 24 | V | A | 0.0000 | |
| 25 | S | A | -0.7392 | |
| 26 | G | A | -0.8651 | |
| 27 | Y | A | 0.5598 | |
| 28 | T | A | 0.5566 | |
| 29 | Y | A | 1.0860 | |
| 30 | C | A | 0.8318 | |
| 31 | S | A | -0.4885 | |
| 32 | Y | A | 0.0000 | |
| 33 | D | A | -1.3452 | |
| 34 | M | A | 0.0000 | |
| 35 | S | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | 0.1971 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.8171 | |
| 40 | A | A | -1.8102 | |
| 41 | P | A | -1.2776 | |
| 42 | G | A | -1.7322 | |
| 43 | K | A | -2.8096 | |
| 44 | E | A | -3.1538 | |
| 45 | R | A | -2.3196 | |
| 46 | E | A | -1.0637 | |
| 47 | F | A | 0.3043 | |
| 48 | V | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | G | A | 0.0000 | |
| 51 | I | A | -1.1900 | |
| 52 | D | A | -2.1450 | |
| 53 | S | A | -1.6054 | |
| 54 | D | A | -2.5071 | |
| 55 | G | A | -1.9141 | |
| 56 | S | A | -1.3764 | |
| 57 | T | A | -0.7698 | |
| 58 | S | A | -0.5946 | |
| 59 | Y | A | -0.6964 | |
| 60 | A | A | -1.1174 | |
| 61 | D | A | -2.3539 | |
| 62 | S | A | -1.7112 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.6284 | |
| 65 | G | A | -1.7754 | |
| 66 | R | A | -1.4955 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -0.8813 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.5657 | |
| 71 | Q | A | -1.3324 | |
| 72 | D | A | -1.7203 | |
| 73 | N | A | -1.8301 | |
| 74 | A | A | -1.3263 | |
| 75 | K | A | -2.1478 | |
| 76 | N | A | -1.2428 | |
| 77 | T | A | -1.0647 | |
| 78 | L | A | 0.0000 | |
| 79 | Y | A | -0.6145 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.2679 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.4463 | |
| 84 | S | A | -1.2318 | |
| 85 | L | A | 0.0000 | |
| 86 | K | A | -2.2841 | |
| 87 | P | A | -1.8220 | |
| 88 | E | A | -2.2892 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -1.1303 | |
| 91 | A | A | 0.0000 | |
| 92 | M | A | -0.6924 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | 0.0000 | |
| 95 | C | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | V | A | 0.0000 | |
| 98 | D | A | -0.8411 | |
| 99 | S | A | -0.3702 | |
| 100 | V | A | -0.0152 | |
| 101 | W | A | 0.6509 | |
| 102 | R | A | -0.8080 | |
| 103 | L | A | 1.1891 | |
| 104 | C | A | 0.6285 | |
| 105 | S | A | -0.2633 | |
| 106 | L | A | -0.6330 | |
| 107 | D | A | -2.1057 | |
| 108 | P | A | -0.9933 | |
| 109 | A | A | -0.6351 | |
| 110 | D | A | -0.7560 | |
| 111 | F | A | 0.9022 | |
| 112 | G | A | 0.3821 | |
| 113 | Y | A | 0.2577 | |
| 114 | W | A | 0.4691 | |
| 115 | G | A | -0.2382 | |
| 116 | Q | A | -1.1175 | |
| 117 | G | A | -0.7326 | |
| 118 | T | A | -0.9392 | |
| 119 | Q | A | -1.5193 | |
| 120 | V | A | 0.0000 | |
| 121 | T | A | -0.9467 | |
| 122 | V | A | 0.0000 | |
| 123 | S | A | -1.1189 | |
| 124 | S | A | -0.8393 |