Project name: 11.40B9

Status: done

Started: 2026-07-07 08:00:18
Settings
Chain sequence(s) H: EVQLQQSGPELVKPGASVKISCKASGYTFTDYNMDWVKQSHGKSLEWIGDINPKIGTTFYNQKFKGKAALTLDKSSSTAYMELRSLASEDSAVYYCATMTYDGYGGWGQGTSVTVSS
L: DIQMNQSPSSLSASLGDTITITCHASQNINVWLRWYQQKPGNIPKLLIYKASNLHTGVPSRFSGSGSGTGFTLTISSLQPEDIATYYCQQGQSYPRTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:35)
Show buried residues

Minimal score value
-2.9041
Maximal score value
1.0379
Average score
-0.6049
Total score value
-135.4866

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.7757
2 V H -0.6338
3 Q H -1.8871
4 L H 0.0000
5 Q H -2.1774
6 Q H 0.0000
7 S H -1.0383
8 G H -0.8484
9 P H -0.2852
11 E H 0.0511
12 L H 0.9764
13 V H -0.1092
14 K H -1.6022
15 P H -1.3543
16 G H -1.1725
17 A H -0.9950
18 S H -1.1296
19 V H 0.0000
20 K H -1.2409
21 I H 0.0000
22 S H -0.6225
23 C H 0.0000
24 K H -1.5363
25 A H 0.0000
26 S H -1.1428
27 G H -0.9741
28 Y H -0.5673
29 T H -0.4667
30 F H 0.0000
35 T H -1.5894
36 D H -2.0710
37 Y H -0.6990
38 N H -0.6116
39 M H 0.0000
40 D H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -1.0274
45 S H -1.6294
46 H H -1.9425
47 G H -1.7760
48 K H -2.4948
49 S H -1.5185
50 L H 0.0000
51 E H -1.1677
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 D H 0.0000
56 I H 0.0000
57 N H -0.4741
58 P H 0.0000
59 K H -1.6242
62 I H 0.7755
63 G H -0.1619
64 T H 0.3156
65 T H 0.6947
66 F H 1.0379
67 Y H -0.2653
68 N H 0.0000
69 Q H -2.5820
70 K H -2.9041
71 F H 0.0000
72 K H -2.6790
74 G H -1.9313
75 K H -1.7583
76 A H 0.0000
77 A H -0.6995
78 L H 0.0000
79 T H -0.3674
80 L H -0.6432
81 D H -1.6716
82 K H -2.2008
83 S H -1.2403
84 S H -1.0008
85 S H -1.1645
86 T H 0.0000
87 A H 0.0000
88 Y H -0.1345
89 M H 0.0000
90 E H -0.9219
91 L H 0.0000
92 R H -1.3032
93 S H -1.1135
94 L H 0.0000
95 A H -1.2400
96 S H -1.4189
97 E H -2.0460
98 D H 0.0000
99 S H -0.6845
100 A H 0.0000
101 V H -0.1567
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 T H 0.0000
107 M H 0.0000
108 T H 0.0977
109 Y H 0.9714
113 D H -0.1365
114 G H 0.0000
115 Y H 0.0000
116 G H -0.4667
117 G H -0.3379
118 W H 0.0000
119 G H 0.0000
120 Q H -1.7942
121 G H -0.8998
122 T H 0.0000
123 S H -0.2855
124 V H 0.0000
125 T H -0.0879
126 V H 0.0000
127 S H -0.5097
128 S H -0.6744
1 D L -2.3130
2 I L 0.0000
3 Q L -2.3461
4 M L 0.0000
5 N L -1.7886
6 Q L -1.2154
7 S L -0.7646
8 P L -0.6536
9 S L -0.8669
10 S L -0.9997
11 L L -0.7091
12 S L -1.0303
13 A L 0.0000
14 S L -0.6730
15 L L 0.1277
16 G L -0.5143
17 D L -0.9088
18 T L -0.5390
19 I L 0.0000
20 T L -0.1896
21 I L 0.0000
22 T L -0.5949
23 C L 0.0000
24 H L -1.9165
25 A L 0.0000
26 S L -2.0448
27 Q L -2.6550
28 N L -2.3294
29 I L 0.0000
36 N L -1.4350
37 V L -0.3831
38 W L -0.2608
39 L L 0.0000
40 R L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -1.0500
45 K L -1.4736
46 P L -0.9776
47 G L -1.3735
48 N L -1.9051
49 I L -0.9423
50 P L 0.0000
51 K L -1.2956
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.4456
56 K L -0.7289
57 A L 0.0000
65 S L -0.6700
66 N L -0.9740
67 L L -0.1391
68 H L -0.4944
69 T L -0.3637
70 G L -0.4377
71 V L -0.2627
72 P L -0.2883
74 S L -0.3761
75 R L -0.6105
76 F L 0.0000
77 S L -0.4113
78 G L -0.4825
79 S L -0.6081
80 G L -0.6870
83 S L -0.8877
84 G L -1.3055
85 T L -1.4697
86 G L -1.0037
87 F L 0.0000
88 T L -0.4433
89 L L 0.0000
90 T L -0.2603
91 I L 0.0000
92 S L -0.7779
93 S L -0.7093
94 L L 0.0000
95 Q L -0.8875
96 P L -0.9631
97 E L -1.3050
98 D L 0.0000
99 I L -0.4755
100 A L 0.0000
101 T L -0.8843
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 G L -0.1440
108 Q L -0.7565
109 S L -0.6299
114 Y L 0.0705
115 P L 0.0000
116 R L 0.0000
117 T L -0.8210
118 F L 0.0000
119 G L 0.0000
120 G L -1.4509
121 G L 0.0000
122 T L 0.0000
123 K L -1.6754
124 L L 0.0000
125 E L -1.5402
126 I L -0.8214
127 K L -1.5972
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Laboratory of Theory of Biopolymers 2018