| Chain sequence(s) |
H: EVQLQQSGPELVKPGASVKISCKASGYTFTDYNMDWVKQSHGKSLEWIGDINPKIGTTFYNQKFKGKAALTLDKSSSTAYMELRSLASEDSAVYYCATMTYDGYGGWGQGTSVTVSS
L: DIQMNQSPSSLSASLGDTITITCHASQNINVWLRWYQQKPGNIPKLLIYKASNLHTGVPSRFSGSGSGTGFTLTISSLQPEDIATYYCQQGQSYPRTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:33)
[INFO] Main: Simulation completed successfully. (00:01:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.7757 | |
| 2 | V | H | -0.6338 | |
| 3 | Q | H | -1.8871 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -2.1774 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -1.0383 | |
| 8 | G | H | -0.8484 | |
| 9 | P | H | -0.2852 | |
| 11 | E | H | 0.0511 | |
| 12 | L | H | 0.9764 | |
| 13 | V | H | -0.1092 | |
| 14 | K | H | -1.6022 | |
| 15 | P | H | -1.3543 | |
| 16 | G | H | -1.1725 | |
| 17 | A | H | -0.9950 | |
| 18 | S | H | -1.1296 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.2409 | |
| 21 | I | H | 0.0000 | |
| 22 | S | H | -0.6225 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.5363 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.1428 | |
| 27 | G | H | -0.9741 | |
| 28 | Y | H | -0.5673 | |
| 29 | T | H | -0.4667 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -1.5894 | |
| 36 | D | H | -2.0710 | |
| 37 | Y | H | -0.6990 | |
| 38 | N | H | -0.6116 | |
| 39 | M | H | 0.0000 | |
| 40 | D | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -1.0274 | |
| 45 | S | H | -1.6294 | |
| 46 | H | H | -1.9425 | |
| 47 | G | H | -1.7760 | |
| 48 | K | H | -2.4948 | |
| 49 | S | H | -1.5185 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.1677 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | D | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -0.4741 | |
| 58 | P | H | 0.0000 | |
| 59 | K | H | -1.6242 | |
| 62 | I | H | 0.7755 | |
| 63 | G | H | -0.1619 | |
| 64 | T | H | 0.3156 | |
| 65 | T | H | 0.6947 | |
| 66 | F | H | 1.0379 | |
| 67 | Y | H | -0.2653 | |
| 68 | N | H | 0.0000 | |
| 69 | Q | H | -2.5820 | |
| 70 | K | H | -2.9041 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -2.6790 | |
| 74 | G | H | -1.9313 | |
| 75 | K | H | -1.7583 | |
| 76 | A | H | 0.0000 | |
| 77 | A | H | -0.6995 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.3674 | |
| 80 | L | H | -0.6432 | |
| 81 | D | H | -1.6716 | |
| 82 | K | H | -2.2008 | |
| 83 | S | H | -1.2403 | |
| 84 | S | H | -1.0008 | |
| 85 | S | H | -1.1645 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.1345 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -0.9219 | |
| 91 | L | H | 0.0000 | |
| 92 | R | H | -1.3032 | |
| 93 | S | H | -1.1135 | |
| 94 | L | H | 0.0000 | |
| 95 | A | H | -1.2400 | |
| 96 | S | H | -1.4189 | |
| 97 | E | H | -2.0460 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.6845 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.1567 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | T | H | 0.0000 | |
| 107 | M | H | 0.0000 | |
| 108 | T | H | 0.0977 | |
| 109 | Y | H | 0.9714 | |
| 113 | D | H | -0.1365 | |
| 114 | G | H | 0.0000 | |
| 115 | Y | H | 0.0000 | |
| 116 | G | H | -0.4667 | |
| 117 | G | H | -0.3379 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.7942 | |
| 121 | G | H | -0.8998 | |
| 122 | T | H | 0.0000 | |
| 123 | S | H | -0.2855 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0879 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5097 | |
| 128 | S | H | -0.6744 | |
| 1 | D | L | -2.3130 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.3461 | |
| 4 | M | L | 0.0000 | |
| 5 | N | L | -1.7886 | |
| 6 | Q | L | -1.2154 | |
| 7 | S | L | -0.7646 | |
| 8 | P | L | -0.6536 | |
| 9 | S | L | -0.8669 | |
| 10 | S | L | -0.9997 | |
| 11 | L | L | -0.7091 | |
| 12 | S | L | -1.0303 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.6730 | |
| 15 | L | L | 0.1277 | |
| 16 | G | L | -0.5143 | |
| 17 | D | L | -0.9088 | |
| 18 | T | L | -0.5390 | |
| 19 | I | L | 0.0000 | |
| 20 | T | L | -0.1896 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.5949 | |
| 23 | C | L | 0.0000 | |
| 24 | H | L | -1.9165 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.0448 | |
| 27 | Q | L | -2.6550 | |
| 28 | N | L | -2.3294 | |
| 29 | I | L | 0.0000 | |
| 36 | N | L | -1.4350 | |
| 37 | V | L | -0.3831 | |
| 38 | W | L | -0.2608 | |
| 39 | L | L | 0.0000 | |
| 40 | R | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.0500 | |
| 45 | K | L | -1.4736 | |
| 46 | P | L | -0.9776 | |
| 47 | G | L | -1.3735 | |
| 48 | N | L | -1.9051 | |
| 49 | I | L | -0.9423 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.2956 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.4456 | |
| 56 | K | L | -0.7289 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.6700 | |
| 66 | N | L | -0.9740 | |
| 67 | L | L | -0.1391 | |
| 68 | H | L | -0.4944 | |
| 69 | T | L | -0.3637 | |
| 70 | G | L | -0.4377 | |
| 71 | V | L | -0.2627 | |
| 72 | P | L | -0.2883 | |
| 74 | S | L | -0.3761 | |
| 75 | R | L | -0.6105 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4113 | |
| 78 | G | L | -0.4825 | |
| 79 | S | L | -0.6081 | |
| 80 | G | L | -0.6870 | |
| 83 | S | L | -0.8877 | |
| 84 | G | L | -1.3055 | |
| 85 | T | L | -1.4697 | |
| 86 | G | L | -1.0037 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.4433 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.2603 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -0.7779 | |
| 93 | S | L | -0.7093 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.8875 | |
| 96 | P | L | -0.9631 | |
| 97 | E | L | -1.3050 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | -0.4755 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.8843 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | G | L | -0.1440 | |
| 108 | Q | L | -0.7565 | |
| 109 | S | L | -0.6299 | |
| 114 | Y | L | 0.0705 | |
| 115 | P | L | 0.0000 | |
| 116 | R | L | 0.0000 | |
| 117 | T | L | -0.8210 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.4509 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.6754 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.5402 | |
| 126 | I | L | -0.8214 | |
| 127 | K | L | -1.5972 |