Project name: hiapp1

Status: done

Started: 2024-06-18 14:14:25
Settings
Chain sequence(s) A: KCNTATCATQRLANFLVHSSNNFGAILSSTNVGSNTY
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:08)
Show buried residues

Minimal score value
-2.0657
Maximal score value
2.7117
Average score
0.1326
Total score value
4.9053

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -2.0657
2 C A -1.6496
3 N A -1.9210
4 T A -1.0817
5 A A -0.5869
6 T A -0.6171
7 C A -1.1010
8 A A -1.4618
9 T A -1.0003
10 Q A -1.6082
11 R A -1.9370
12 L A 0.4668
13 A A 0.1679
14 N A -0.1503
15 F A 1.6524
16 L A 2.1486
17 V A 1.5609
18 H A 0.1763
19 S A 0.6196
20 S A 0.1387
21 N A -0.7239
22 N A 0.5301
23 F A 2.1175
24 G A 1.4908
25 A A 1.3714
26 I A 2.7117
27 L A 2.5249
28 S A 1.2780
29 S A 1.0539
30 T A 0.2304
31 N A -0.3693
32 V A 0.9685
33 G A -0.3253
34 S A -0.3784
35 N A -0.5300
36 T A 0.1534
37 Y A 1.0510
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Laboratory of Theory of Biopolymers 2018