Project name: eae7544f683aa5f

Status: done

Started: 2025-06-25 13:47:44
Settings
Chain sequence(s) A: MRRWCYRKCYKGYCYRKCRGGSSRSSSPQRVNGKVKGRIFVGSSQTPIVFENTDLASYVVMNHGNSYTAISTIPETVGYSLLPLAPVGGIIGWMFAVEQDGFKNGFSITGGEFTRQAEVTFQGHPGNLVIKQRFSGIDEKGNLTIDTELEGRVPQIPEGSSVHIEPYTELYHYSTSVITSSSTREYTVTEPERDGASPSRIYTYQWRQTITFQESTHDDSRPALPSTQQLSVDSVSVLYNQEEKILAYALSNSIGPVREGSPDAKHHHHHH
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:24)
Show buried residues

Minimal score value
-3.8828
Maximal score value
1.3862
Average score
-0.9506
Total score value
-257.6255

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A -0.7221
2 R A -2.3804
3 R A -2.7993
4 W A -1.5323
5 C A -1.4487
6 Y A -1.1904
7 R A -1.5244
8 K A -0.9316
9 C A 0.1087
10 Y A 0.7702
11 K A -0.7963
12 G A -0.2668
13 Y A 0.9153
14 C A -0.0028
15 Y A -0.4840
16 R A -2.3832
17 K A -2.5274
18 C A -1.8867
19 R A -2.8010
20 G A -2.0925
21 G A -2.1638
22 S A -1.5271
23 S A -1.3707
24 R A -2.1292
25 S A -1.3351
26 S A -0.9491
27 S A -0.5720
28 P A -0.0878
29 Q A 0.0000
30 R A -0.4903
31 V A 0.0000
32 N A -1.3927
33 G A -2.0658
34 K A -3.2312
35 V A 0.0000
36 K A -3.0564
37 G A 0.0000
38 R A -1.4798
39 I A 0.0000
40 F A -0.5760
41 V A 0.0000
42 G A -0.9632
43 S A -0.8529
44 S A -0.8578
45 Q A -1.2517
46 T A -0.5000
47 P A -0.2083
48 I A 0.5921
49 V A 0.3381
50 F A 0.0000
51 E A -3.1370
52 N A -3.0664
53 T A 0.0000
54 D A -2.4892
55 L A 0.0000
56 A A -0.5500
57 S A 0.0000
58 Y A 0.7893
59 V A 0.0000
60 V A 0.2116
61 M A -0.3088
62 N A -1.4289
63 H A -1.3651
64 G A 0.0000
65 N A -0.3962
66 S A 0.0000
67 Y A 0.6747
68 T A 0.0000
69 A A 0.2652
70 I A 0.0000
71 S A -1.0731
72 T A -1.3861
73 I A 0.0000
74 P A -0.6840
75 E A -2.4039
76 T A -1.1206
77 V A 0.0000
78 G A 0.0000
79 Y A 0.0000
80 S A 0.0000
81 L A 0.0000
82 L A 0.0000
83 P A 0.0000
84 L A 0.0000
85 A A 0.0000
86 P A -0.0540
87 V A 0.0000
88 G A 0.0000
89 G A -0.0208
90 I A 0.0000
91 I A 0.0000
92 G A 0.0000
93 W A 0.0000
94 M A 0.0000
95 F A 0.0000
96 A A 0.0000
97 V A -0.6492
98 E A -1.3555
99 Q A -1.7793
100 D A -2.4168
101 G A -1.5908
102 F A -1.0728
103 K A -1.1020
104 N A 0.0000
105 G A 0.0000
106 F A 0.0000
107 S A -0.1094
108 I A -0.2752
109 T A 0.0000
110 G A -0.8659
111 G A 0.0000
112 E A -1.9041
113 F A 0.0000
114 T A -1.6778
115 R A 0.0000
116 Q A -2.3015
117 A A 0.0000
118 E A -2.1479
119 V A 0.0000
120 T A -1.5028
121 F A 0.0000
122 Q A -1.8013
123 G A -1.3260
124 H A -1.4126
125 P A -1.1777
126 G A -1.1069
127 N A -1.4086
128 L A 0.0000
129 V A -1.4277
130 I A 0.0000
131 K A -2.5415
132 Q A 0.0000
133 R A -3.0128
134 F A 0.0000
135 S A -1.1934
136 G A 0.0000
137 I A -0.5500
138 D A -1.6827
139 E A -2.7525
140 K A -2.7555
141 G A -1.6012
142 N A -1.2332
143 L A 0.0000
144 T A -1.2261
145 I A 0.0000
146 D A -2.9216
147 T A 0.0000
148 E A -3.0040
149 L A 0.0000
150 E A -2.1548
151 G A -1.2583
152 R A -1.2812
153 V A 0.0000
154 P A 0.0000
155 Q A -1.5346
156 I A 0.0000
157 P A -1.5483
158 E A -2.6520
159 G A -2.0281
160 S A 0.0000
161 S A -0.5515
162 V A 0.0000
163 H A -1.3197
164 I A 0.0000
165 E A -2.7033
166 P A -1.6134
167 Y A -0.9763
168 T A -0.4765
169 E A -0.2253
170 L A -0.0817
171 Y A 0.0000
172 H A -0.3950
173 Y A 0.0054
174 S A -0.0283
175 T A -0.1414
176 S A -0.2292
177 V A 0.3837
178 I A 0.0000
179 T A -0.4371
180 S A 0.0000
181 S A -1.2493
182 S A 0.0000
183 T A -1.3471
184 R A -1.5706
185 E A -2.0096
186 Y A 0.0000
187 T A -0.9632
188 V A 0.0000
189 T A -1.2226
190 E A -2.1899
191 P A -2.3317
192 E A -3.5464
193 R A -3.8828
194 D A -3.3267
195 G A -2.4380
196 A A -2.1303
197 S A -2.0081
198 P A -1.5838
199 S A -1.0331
200 R A -1.2026
201 I A 0.2884
202 Y A -0.2531
203 T A -0.9487
204 Y A 0.0000
205 Q A -1.9681
206 W A 0.0000
207 R A -2.3767
208 Q A 0.0000
209 T A -0.8948
210 I A 0.0000
211 T A -0.6370
212 F A 0.0000
213 Q A -1.6384
214 E A -1.2379
215 S A -1.4194
216 T A -1.3349
217 H A -1.9373
218 D A -2.2623
219 D A -2.7258
220 S A -1.9321
221 R A -2.0315
222 P A -1.1060
223 A A -0.4372
224 L A 0.0519
225 P A -0.1556
226 S A -0.2497
227 T A -0.0470
228 Q A 0.0000
229 Q A 0.0000
230 L A 0.0000
231 S A -0.2418
232 V A 0.0000
233 D A -1.6159
234 S A -1.1053
235 V A -0.9379
236 S A -0.2312
237 V A 0.6589
238 L A 1.3862
239 Y A 0.0000
240 N A -1.5926
241 Q A -2.8190
242 E A -3.3748
243 E A -3.3096
244 K A -2.5739
245 I A -1.0562
246 L A 0.0000
247 A A 0.6495
248 Y A 0.0000
249 A A 0.2780
250 L A 0.0000
251 S A -0.6608
252 N A 0.0000
253 S A -0.5065
254 I A 0.0000
255 G A 0.0000
256 P A -0.7839
257 V A -0.7557
258 R A -2.4571
259 E A -3.0512
260 G A -2.1282
261 S A -1.6819
262 P A -1.5487
263 D A -1.9461
264 A A -2.4256
265 K A -3.4167
266 H A -3.1846
267 H A -3.1723
268 H A -3.1659
269 H A -3.0504
270 H A -2.6166
271 H A -2.1158
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Laboratory of Theory of Biopolymers 2018