Project name: query_structure

Status: done

Started: 2026-03-16 23:01:47
Settings
Chain sequence(s) A: CSCKNKVCYNGIPCAESCVYIPCTITALLG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:14)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:15)
Show buried residues

Minimal score value
-2.5903
Maximal score value
2.5614
Average score
0.5305
Total score value
15.9152

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 1.0499
2 S A 0.1096
3 C A -0.8877
4 K A -2.2929
5 N A -2.5903
6 K A -2.1338
7 V A -0.6223
8 C A 0.1983
9 Y A 0.9321
10 N A -0.3183
11 G A -0.1981
12 I A 0.5551
13 P A -0.4846
14 C A 0.4776
15 A A 0.0363
16 E A -0.8706
17 S A 0.3531
18 C A 1.2422
19 V A 2.3303
20 Y A 2.3235
21 I A 2.2333
22 P A 1.2608
23 C A 0.7230
24 T A 1.2948
25 I A 2.1322
26 T A 1.7425
27 A A 1.4341
28 L A 2.5614
29 L A 2.4031
30 G A 0.9206
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Laboratory of Theory of Biopolymers 2018