| Chain sequence(s) |
A: NMAAVNMNAINFAAVNMNAIHAVNMNAI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:14)
[INFO] Main: Simulation completed successfully. (00:00:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -0.4546 | |
| 2 | M | A | 0.8636 | |
| 3 | A | A | 0.4579 | |
| 4 | A | A | 0.5730 | |
| 5 | V | A | 1.5045 | |
| 6 | N | A | 0.5915 | |
| 7 | M | A | 1.3468 | |
| 8 | N | A | 0.4253 | |
| 9 | A | A | 1.1900 | |
| 10 | I | A | 2.1513 | |
| 11 | N | A | 0.8415 | |
| 12 | F | A | 2.0669 | |
| 13 | A | A | 1.3702 | |
| 14 | A | A | 1.1697 | |
| 15 | V | A | 1.6759 | |
| 16 | N | A | 0.3278 | |
| 17 | M | A | 0.7865 | |
| 18 | N | A | -0.1962 | |
| 19 | A | A | 0.5260 | |
| 20 | I | A | 1.1720 | |
| 21 | H | A | -0.1694 | |
| 22 | A | A | 0.2501 | |
| 23 | V | A | 1.5878 | |
| 24 | N | A | 0.3951 | |
| 25 | M | A | 1.0809 | |
| 26 | N | A | 0.1559 | |
| 27 | A | A | 0.7247 | |
| 28 | I | A | 1.9584 |