| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKDGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSIGHPLFNKFGDTENPTEYQHCGADDRVNFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRCGPEGHPLPAAPPPSPLYVPPPPSSPEAVLPPHDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9484 | |
| 2 | L | A | 1.9725 | |
| 3 | P | A | 0.6490 | |
| 4 | P | A | 0.3429 | |
| 5 | T | A | 0.1041 | |
| 6 | T | A | 0.1220 | |
| 7 | P | A | 0.1694 | |
| 8 | V | A | 1.2185 | |
| 9 | A | A | 0.0260 | |
| 10 | K | A | -1.1498 | |
| 11 | V | A | -0.3925 | |
| 12 | Q | A | -1.5191 | |
| 13 | S | A | -1.5929 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4199 | |
| 16 | E | A | -2.4378 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4597 | |
| 20 | P | A | 0.1077 | |
| 21 | T | A | 0.1147 | |
| 22 | S | A | -0.1721 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1197 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1496 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7017 | |
| 31 | R | A | -2.5836 | |
| 32 | L | A | -0.7315 | |
| 33 | L | A | 1.2403 | |
| 34 | T | A | 1.6410 | |
| 35 | V | A | 1.9855 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2244 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6299 | |
| 40 | K | A | -1.6233 | |
| 41 | D | A | -0.8771 | |
| 42 | I | A | 0.8451 | |
| 43 | V | A | 0.9068 | |
| 44 | K | A | -1.4249 | |
| 45 | D | A | -2.4380 | |
| 46 | G | A | -1.4763 | |
| 47 | K | A | -1.0930 | |
| 48 | V | A | 1.4332 | |
| 49 | V | A | 2.0041 | |
| 50 | V | A | 1.3075 | |
| 51 | P | A | 0.5029 | |
| 52 | K | A | -0.6051 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.0894 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4627 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2603 | |
| 70 | K | A | -1.8038 | |
| 71 | F | A | -0.6575 | |
| 72 | A | A | -0.5766 | |
| 73 | L | A | -0.8670 | |
| 74 | P | A | -1.2646 | |
| 75 | Q | A | -2.4739 | |
| 76 | K | A | -3.0908 | |
| 77 | D | A | -2.9840 | |
| 78 | F | A | -1.6410 | |
| 79 | Y | A | -1.9206 | |
| 80 | D | A | -2.7591 | |
| 81 | P | A | -2.4154 | |
| 82 | E | A | -3.0749 | |
| 83 | K | A | -3.4421 | |
| 84 | E | A | -2.5045 | |
| 85 | R | A | -1.3167 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6703 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9913 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3217 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6719 | |
| 99 | G | A | -0.5385 | |
| 100 | P | A | -0.4321 | |
| 101 | L | A | -0.0049 | |
| 102 | G | A | -0.2745 | |
| 103 | K | A | -0.7823 | |
| 104 | G | A | -0.6071 | |
| 105 | S | A | -0.5984 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | -0.1478 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.2021 | |
| 110 | L | A | -0.1719 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2787 | |
| 113 | K | A | -0.4498 | |
| 114 | F | A | -0.9602 | |
| 115 | G | A | -1.1052 | |
| 116 | D | A | -1.5733 | |
| 117 | T | A | -1.1587 | |
| 118 | E | A | -1.9025 | |
| 119 | N | A | -2.2635 | |
| 120 | P | A | -1.9789 | |
| 121 | T | A | -1.6082 | |
| 122 | E | A | -2.2045 | |
| 123 | Y | A | -0.8377 | |
| 124 | Q | A | -1.2796 | |
| 125 | H | A | -0.8548 | |
| 126 | C | A | -0.9167 | |
| 127 | G | A | -1.3460 | |
| 128 | A | A | -1.2078 | |
| 129 | D | A | -2.1858 | |
| 130 | D | A | -1.7519 | |
| 131 | R | A | -1.4568 | |
| 132 | V | A | -0.4978 | |
| 133 | N | A | -0.9190 | |
| 134 | F | A | -0.4046 | |
| 135 | S | A | -0.4097 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.8056 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2298 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5577 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2438 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0846 | |
| 157 | D | A | 0.3303 | |
| 158 | I | A | 0.8546 | |
| 159 | A | A | 0.1178 | |
| 160 | E | A | -1.4766 | |
| 161 | P | A | -0.2510 | |
| 162 | C | A | 0.1643 | |
| 163 | P | A | -0.1851 | |
| 164 | G | A | -0.0921 | |
| 165 | L | A | 0.5587 | |
| 166 | P | A | -0.1263 | |
| 167 | P | A | -0.3474 | |
| 168 | G | A | -0.4215 | |
| 169 | A | A | -0.0240 | |
| 170 | C | A | 0.7515 | |
| 171 | P | A | 0.5437 | |
| 172 | P | A | 0.6876 | |
| 173 | I | A | 2.0263 | |
| 174 | Q | A | 0.8226 | |
| 175 | L | A | 1.4165 | |
| 176 | V | A | 0.8125 | |
| 177 | N | A | -0.3049 | |
| 178 | S | A | 0.0257 | |
| 179 | V | A | 0.4292 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3798 | |
| 182 | D | A | 0.0834 | |
| 183 | G | A | -0.1597 | |
| 184 | D | A | -0.5644 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1300 | |
| 190 | F | A | 0.0603 | |
| 191 | G | A | -0.1057 | |
| 192 | N | A | -0.2955 | |
| 193 | M | A | -0.1713 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3945 | |
| 197 | E | A | -2.5994 | |
| 198 | L | A | -1.2136 | |
| 199 | Q | A | -2.5335 | |
| 200 | Q | A | -3.3273 | |
| 201 | D | A | -3.5924 | |
| 202 | R | A | -3.3254 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1654 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3834 | |
| 211 | S | A | -1.8962 | |
| 212 | T | A | -1.4805 | |
| 213 | R | A | -2.1798 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1783 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3237 | |
| 220 | L | A | 0.5186 | |
| 221 | K | A | -1.2698 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8737 | |
| 224 | N | A | -1.5628 | |
| 225 | E | A | -1.3107 | |
| 226 | A | A | -0.6703 | |
| 227 | Y | A | -0.3945 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6952 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0903 | |
| 234 | F | A | 0.2706 | |
| 235 | G | A | -0.8471 | |
| 236 | R | A | -2.6759 | |
| 237 | R | A | -3.0357 | |
| 238 | E | A | -2.2128 | |
| 239 | Q | A | -0.1814 | |
| 240 | V | A | 1.5232 | |
| 241 | Y | A | 1.2383 | |
| 242 | A | A | 0.1709 | |
| 243 | R | A | -1.2579 | |
| 244 | H | A | -1.0312 | |
| 245 | F | A | 0.0441 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.7392 | |
| 249 | C | A | -0.9331 | |
| 250 | G | A | -0.9735 | |
| 251 | P | A | -0.9568 | |
| 252 | E | A | -1.3919 | |
| 253 | G | A | -1.2918 | |
| 254 | H | A | -1.4662 | |
| 255 | P | A | -0.7311 | |
| 256 | L | A | 0.3861 | |
| 257 | P | A | 0.0892 | |
| 258 | A | A | 0.1454 | |
| 259 | A | A | 0.3600 | |
| 260 | P | A | -0.2136 | |
| 261 | P | A | -0.1407 | |
| 262 | P | A | 0.0499 | |
| 263 | S | A | 0.5623 | |
| 264 | P | A | 0.6806 | |
| 265 | L | A | 1.9332 | |
| 266 | Y | A | 1.7566 | |
| 267 | V | A | 1.9408 | |
| 268 | P | A | 0.7592 | |
| 269 | P | A | 0.2211 | |
| 270 | P | A | -0.4638 | |
| 271 | P | A | -0.4327 | |
| 272 | S | A | -0.4204 | |
| 273 | S | A | -0.4077 | |
| 274 | P | A | -0.2782 | |
| 275 | E | A | -0.2623 | |
| 276 | A | A | 0.3904 | |
| 277 | V | A | 1.5832 | |
| 278 | L | A | 1.1617 | |
| 279 | P | A | 0.0446 | |
| 280 | P | A | -0.2867 | |
| 281 | H | A | -0.5936 | |
| 282 | D | A | -1.1236 | |
| 283 | Y | A | 0.6942 | |
| 284 | F | A | 0.6662 | |
| 285 | G | A | 0.2496 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9011 | |
| 291 | L | A | 1.6164 | |
| 292 | V | A | 0.6273 | |
| 293 | S | A | -0.1419 | |
| 294 | S | A | -0.9656 | |
| 295 | D | A | -1.8374 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1695 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6807 | |
| 301 | R | A | -1.9740 | |
| 302 | P | A | -1.0119 | |
| 303 | F | A | -0.1867 | |
| 304 | W | A | -0.5354 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0873 | |
| 307 | R | A | -2.8302 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2366 | |
| 310 | G | A | -1.2016 | |
| 311 | N | A | -1.2859 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9203 | |
| 319 | N | A | -0.8737 | |
| 320 | E | A | -1.0366 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3669 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2039 | |
| 333 | N | A | 0.3844 | |
| 334 | F | A | 1.4521 | |
| 335 | T | A | 0.7297 | |
| 336 | I | A | 0.3738 | |
| 337 | S | A | -0.9502 | |
| 338 | Q | A | -1.6756 | |
| 339 | Q | A | -1.1830 | |
| 340 | L | A | 0.7140 | |
| 341 | C | A | 0.3037 | |
| 342 | T | A | -0.1920 | |
| 343 | P | A | -0.5980 | |
| 344 | E | A | -1.6190 | |
| 345 | P | A | -1.0854 | |
| 346 | N | A | -0.8030 | |
| 347 | V | A | 0.9232 | |
| 348 | Y | A | 1.1004 | |
| 349 | D | A | -0.1225 | |
| 350 | P | A | -0.3599 | |
| 351 | S | A | -0.2927 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7250 | |
| 354 | K | A | -1.7218 | |
| 355 | N | A | -1.7381 | |
| 356 | Y | A | -0.1199 | |
| 357 | L | A | 0.5513 | |
| 358 | R | A | 0.8872 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4609 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | 0.0002 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8832 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6627 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2789 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3260 | |
| 376 | L | A | -1.7579 | |
| 377 | D | A | -2.0315 | |
| 378 | P | A | -1.0629 | |
| 379 | G | A | -1.0218 | |
| 380 | V | A | -0.9282 | |
| 381 | L | A | -0.5488 | |
| 382 | A | A | -0.6661 | |
| 383 | H | A | -0.8520 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4140 | |
| 386 | T | A | -0.5751 | |
| 387 | M | A | -0.3345 | |
| 388 | N | A | -0.8709 | |
| 389 | P | A | -1.2936 | |
| 390 | T | A | -1.5402 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5407 | |
| 393 | E | A | -2.9235 | |
| 394 | N | A | -2.7178 | |
| 395 | W | A | -1.5071 | |
| 396 | N | A | -1.2521 | |
| 397 | L | A | -0.1350 | |
| 398 | G | A | 0.5742 | |
| 399 | F | A | 2.4463 | |
| 400 | V | A | 1.8777 | |
| 401 | P | A | 0.0940 | |
| 402 | P | A | -1.8854 | |
| 403 | K | A | -3.4908 | |
| 404 | E | A | -3.8424 | |
| 405 | R | A | -4.1133 | |
| 406 | E | A | -3.8487 | |
| 407 | D | A | -2.9031 | |
| 408 | P | A | -1.7805 | |
| 409 | Y | A | -0.9882 | |
| 410 | K | A | -2.0998 | |
| 411 | G | A | -0.6362 | |
| 412 | L | A | 0.6710 | |
| 413 | I | A | 1.5940 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3648 | |
| 416 | E | A | -1.6019 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8228 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8748 | |
| 421 | E | A | -2.4896 | |
| 422 | R | A | -1.9869 | |
| 423 | F | A | -1.0200 | |
| 424 | S | A | -1.3241 | |
| 425 | Q | A | -1.7985 | |
| 426 | D | A | -2.8901 | |
| 427 | L | A | -1.9845 | |
| 428 | D | A | -2.7471 | |
| 429 | Q | A | -2.5926 | |
| 430 | F | A | -1.4281 | |
| 431 | A | A | -0.8956 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5831 | |
| 435 | K | A | -0.7279 | |
| 436 | F | A | 0.1546 | |
| 437 | L | A | 1.0375 | |
| 438 | Y | A | 0.8243 | |
| 439 | Q | A | -0.2737 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine