| Chain sequence(s) |
L: YGYDLKVPETYKEFYD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:26)
[INFO] Main: Simulation completed successfully. (00:00:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 179 | Y | L | 0.9615 | |
| 180 | G | L | 0.0124 | |
| 181 | Y | L | 0.9069 | |
| 182 | D | L | -1.2722 | |
| 183 | L | L | 0.9141 | |
| 184 | K | L | -1.0945 | |
| 185 | V | L | 1.4506 | |
| 186 | P | L | -0.0859 | |
| 187 | E | L | -1.8406 | |
| 188 | T | L | -0.1345 | |
| 189 | Y | L | 0.9973 | |
| 190 | K | L | -1.6928 | |
| 191 | E | L | -1.3612 | |
| 192 | F | L | 1.9392 | |
| 193 | Y | L | 1.4602 | |
| 194 | D | L | -0.7132 |