| Chain sequence(s) |
B: AELAALKAKLKGAKKAWDLIEEVAKQLGLDYEKIKKKTEKKKAEIDKIIA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:14)
[INFO] Main: Simulation completed successfully. (00:02:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | -0.1988 | |
| 2 | E | B | -0.7416 | |
| 3 | L | B | 0.8096 | |
| 4 | A | B | 0.2452 | |
| 5 | A | B | -0.3215 | |
| 6 | L | B | 0.3660 | |
| 7 | K | B | -0.5593 | |
| 8 | A | B | -1.3219 | |
| 9 | K | B | -2.1540 | |
| 10 | L | B | -1.8548 | |
| 11 | K | B | -3.1281 | |
| 12 | G | B | -2.5754 | |
| 13 | A | B | -2.1121 | |
| 14 | K | B | -3.0451 | |
| 15 | K | B | -2.6762 | |
| 16 | A | B | -1.1987 | |
| 17 | W | B | -1.6627 | |
| 18 | D | B | -1.6853 | |
| 19 | L | B | -0.0854 | |
| 20 | I | B | 0.2248 | |
| 21 | E | B | -2.0353 | |
| 22 | E | B | -1.5819 | |
| 23 | V | B | 0.3410 | |
| 24 | A | B | 0.0000 | |
| 25 | K | B | -2.2807 | |
| 26 | Q | B | -1.1748 | |
| 27 | L | B | 0.3822 | |
| 28 | G | B | -0.7603 | |
| 29 | L | B | -0.4306 | |
| 30 | D | B | -2.5028 | |
| 31 | Y | B | -2.8696 | |
| 32 | E | B | -4.0632 | |
| 33 | K | B | -3.9287 | |
| 34 | I | B | -3.2513 | |
| 35 | K | B | -4.4785 | |
| 36 | K | B | -4.7545 | |
| 37 | K | B | -4.1569 | |
| 38 | T | B | 0.0000 | |
| 39 | E | B | -4.4746 | |
| 40 | K | B | -4.4094 | |
| 41 | K | B | -3.8261 | |
| 42 | K | B | -3.7064 | |
| 43 | A | B | -2.9208 | |
| 44 | E | B | -2.8503 | |
| 45 | I | B | 0.0000 | |
| 46 | D | B | -2.5348 | |
| 47 | K | B | -1.8299 | |
| 48 | I | B | 0.6315 | |
| 49 | I | B | 0.1162 | |
| 50 | A | B | -0.3714 |