| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAFDGYWYDYVSFYRITYGESGGNSPVQEFTVPSSSSTATISGLKPGVDYTITVYAYSHSQQQYLSPNSINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:16)
[INFO] Main: Simulation completed successfully. (00:01:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6552 | |
| 2 | S | A | 0.5699 | |
| 3 | S | A | 0.3297 | |
| 4 | V | A | -0.1227 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.2281 | |
| 7 | K | A | -2.5304 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.4012 | |
| 10 | V | A | 0.4280 | |
| 11 | V | A | 1.6988 | |
| 12 | A | A | 0.9729 | |
| 13 | A | A | 0.3093 | |
| 14 | T | A | -0.5413 | |
| 15 | P | A | -1.1526 | |
| 16 | T | A | -1.0058 | |
| 17 | S | A | -0.5434 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.8270 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.5900 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.6260 | |
| 24 | A | A | -1.2503 | |
| 25 | F | A | -0.3273 | |
| 26 | D | A | -1.1226 | |
| 27 | G | A | 0.3894 | |
| 28 | Y | A | 1.6139 | |
| 29 | W | A | 1.6678 | |
| 30 | Y | A | 1.2450 | |
| 31 | D | A | -0.3451 | |
| 32 | Y | A | 0.0894 | |
| 33 | V | A | 0.0000 | |
| 34 | S | A | -0.3781 | |
| 35 | F | A | 0.2599 | |
| 36 | Y | A | 0.0000 | |
| 37 | R | A | -0.3347 | |
| 38 | I | A | 0.0000 | |
| 39 | T | A | 0.0000 | |
| 40 | Y | A | -0.3003 | |
| 41 | G | A | 0.0000 | |
| 42 | E | A | -1.8619 | |
| 43 | S | A | -1.8225 | |
| 44 | G | A | -1.4101 | |
| 45 | G | A | -1.5385 | |
| 46 | N | A | -1.5400 | |
| 47 | S | A | -0.8419 | |
| 48 | P | A | -0.3290 | |
| 49 | V | A | 0.4206 | |
| 50 | Q | A | -0.8756 | |
| 51 | E | A | -1.6296 | |
| 52 | F | A | -0.6677 | |
| 53 | T | A | -0.2361 | |
| 54 | V | A | 0.0000 | |
| 55 | P | A | -0.2663 | |
| 56 | S | A | -0.0017 | |
| 57 | S | A | -0.0946 | |
| 58 | S | A | -0.4248 | |
| 59 | S | A | -0.5666 | |
| 60 | T | A | -0.2191 | |
| 61 | A | A | 0.0000 | |
| 62 | T | A | 0.2386 | |
| 63 | I | A | 0.0000 | |
| 64 | S | A | -0.6638 | |
| 65 | G | A | -1.0365 | |
| 66 | L | A | 0.0000 | |
| 67 | K | A | -2.4925 | |
| 68 | P | A | -1.7798 | |
| 69 | G | A | -1.6339 | |
| 70 | V | A | -1.8735 | |
| 71 | D | A | -2.9407 | |
| 72 | Y | A | 0.0000 | |
| 73 | T | A | -0.9080 | |
| 74 | I | A | 0.0000 | |
| 75 | T | A | -0.3413 | |
| 76 | V | A | 0.0000 | |
| 77 | Y | A | 0.1830 | |
| 78 | A | A | 0.0000 | |
| 79 | Y | A | -0.1386 | |
| 80 | S | A | 0.0000 | |
| 81 | H | A | -1.9364 | |
| 82 | S | A | -1.5595 | |
| 83 | Q | A | -1.8771 | |
| 84 | Q | A | -2.2764 | |
| 85 | Q | A | -1.6709 | |
| 86 | Y | A | -0.1223 | |
| 87 | L | A | 0.1441 | |
| 88 | S | A | -0.0982 | |
| 89 | P | A | -0.1782 | |
| 90 | N | A | -0.7047 | |
| 91 | S | A | -0.7568 | |
| 92 | I | A | -0.6664 | |
| 93 | N | A | -1.8369 | |
| 94 | Y | A | -1.6480 | |
| 95 | R | A | -2.9063 | |
| 96 | T | A | -1.8528 |