Project name: ec259401b71cb58

Status: done

Started: 2026-02-12 09:12:14
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Chain sequence(s) A: GGGHKFG
C: GGGHKFG
B: GGGHKFG
E: GGGHKFG
D: GGGHKFG
G: GGGHKFG
F: GGGHKFG
I: GGGHKFG
H: GGGHKFG
K: GGGHKFG
J: GGGHKFG
M: GGGHKFG
L: GGGHKFG
O: GGGHKFG
N: GGGHKFG
Q: GGGHKFG
P: GGGHKFG
S: GGGHKFG
R: GGGHKFG
T: GGGHKFG
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:56)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:01)
Show buried residues

Minimal score value
-2.8372
Maximal score value
0.0
Average score
-1.477
Total score value
-206.7808

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.2348
2 G A -1.2541
3 G A -1.5408
4 H A -1.7300
5 K A -2.3687
6 F A 0.0000
7 G A -1.4626
1 G B -1.2229
2 G B -1.2447
3 G B -1.4784
4 H B -1.5971
5 K B -2.1491
6 F B 0.0000
7 G B -1.3903
1 G C -1.2350
2 G C -1.2576
3 G C -1.5181
4 H C -1.6692
5 K C -2.2703
6 F C 0.0000
7 G C -1.4323
1 G D -1.2530
2 G D -1.2843
3 G D -1.5639
4 H D -1.7589
5 K D -2.4217
6 F D 0.0000
7 G D -1.4647
1 G E -1.2504
2 G E -1.3346
3 G E -1.6250
4 H E -1.8749
5 K E -2.5265
6 F E 0.0000
7 G E -1.4975
1 G F -1.2867
2 G F -1.4789
3 G F -2.0721
4 H F -2.3011
5 K F -2.7987
6 F F 0.0000
7 G F -1.3983
1 G G -1.1580
2 G G -1.4028
3 G G -2.1254
4 H G -2.4541
5 K G -2.7353
6 F G -1.3922
7 G G -1.0416
1 G H -1.1512
2 G H -1.3741
3 G H -2.0441
4 H H -2.3895
5 K H -2.7262
6 F H -1.8172
7 G H -1.0485
1 G I -1.2670
2 G I -1.4433
3 G I -1.9979
4 H I -2.2602
5 K I -2.6452
6 F I 0.0000
7 G I -1.4601
1 G J -1.2222
2 G J -1.3165
3 G J -1.5435
4 H J -1.7473
5 K J -2.3595
6 F J 0.0000
7 G J -1.4179
1 G K -1.2281
2 G K -1.2383
3 G K -1.5076
4 H K -1.6514
5 K K -2.2103
6 F K 0.0000
7 G K -1.4277
1 G L -1.2470
2 G L -1.2612
3 G L -1.5458
4 H L -1.7149
5 K L -2.3895
6 F L 0.0000
7 G L -1.4703
1 G M -1.2653
2 G M -1.2957
3 G M -1.5703
4 H M -1.7240
5 K M -2.2960
6 F M 0.0000
7 G M -1.4354
1 G N -1.3058
2 G N -1.3656
3 G N -1.6622
4 H N -1.8981
5 K N -2.5842
6 F N 0.0000
7 G N -1.4458
1 G O -1.3153
2 G O -1.5198
3 G O -2.0416
4 H O -2.1581
5 K O -2.4122
6 F O 0.0000
7 G O -1.1452
1 G P -1.2788
2 G P -1.3091
3 G P -1.6132
4 H P -1.7785
5 K P -2.4753
6 F P 0.0000
7 G P -1.4850
1 G Q -1.3030
2 G Q -1.4949
3 G Q -2.0199
4 H Q -2.2368
5 K Q -2.8372
6 F Q 0.0000
7 G Q -1.4676
1 G R -1.0475
2 G R -1.5232
3 G R -1.9633
4 H R -2.3098
5 K R -2.6114
6 F R -1.4770
7 G R -1.0677
1 G S -1.0534
2 G S -1.5435
3 G S -1.9623
4 H S -2.2394
5 K S -2.2369
6 F S -0.5551
7 G S -0.5632
1 G T -1.2225
2 G T -1.2383
3 G T -1.4988
4 H T -1.5793
5 K T -2.2529
6 F T 0.0000
7 G T -1.4153
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Laboratory of Theory of Biopolymers 2018