Project name: ec38acb96aea970

Status: done

Started: 2026-05-30 14:27:58
Settings
Chain sequence(s) H: EVQLVESGGGLVQPGGSLRLSCAASGFAFSSYDMSWVRQAPGKGLDWVATISGGGRYTYYPDSVKGRFTISRDNSKNNLYLQMNSLRAEDTALYYCANRYGEAWFAYWGQGTLVTVSS
L: DIQMTQSPSSMSASVGDRVTFTCRASQDINTYLSWFQQKPGKSPKTLIYRANRLVSGVPSRFSGSGSGQDYTLTISSLQPEDMATYYCLQYDEFPLTFGAGTKLELK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:24)
Show buried residues

Minimal score value
-3.2701
Maximal score value
1.3094
Average score
-0.7496
Total score value
-168.6585

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0650
2 V H -1.1207
3 Q H -1.3547
4 L H 0.0000
5 V H 0.2553
6 E H 0.0000
7 S H -0.3817
8 G H -0.5202
9 G H 0.1428
11 G H 0.6679
12 L H 1.3094
13 V H -0.1419
14 Q H -1.4517
15 P H -1.7116
16 G H -1.6762
17 G H -1.1861
18 S H -1.1170
19 L H -0.7622
20 R H -1.5570
21 L H 0.0000
22 S H -0.3946
23 C H 0.0000
24 A H -0.4991
25 A H 0.0000
26 S H -1.1502
27 G H -1.2474
28 F H -0.4669
29 A H -0.2398
30 F H 0.0000
35 S H -1.0096
36 S H -0.3906
37 Y H -0.0131
38 D H -0.2968
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.9390
45 A H -1.2084
46 P H -0.9250
47 G H -1.5451
48 K H -2.3044
49 G H -1.5034
50 L H 0.0000
51 D H -1.7299
52 W H 0.0000
53 V H 0.0000
54 A H 0.0000
55 T H 0.0000
56 I H 0.0000
57 S H -0.7383
58 G H -0.8976
59 G H -1.4310
62 G H -1.5484
63 R H -1.8973
64 Y H -0.6272
65 T H -0.1735
66 Y H 0.0807
67 Y H -0.7546
68 P H -1.3915
69 D H -2.4566
70 S H -1.8503
71 V H 0.0000
72 K H -2.5962
74 G H -1.8097
75 R H -1.4342
76 F H 0.0000
77 T H -0.7551
78 I H 0.0000
79 S H -0.6676
80 R H -1.3848
81 D H -2.1827
82 N H -2.6214
83 S H -2.0772
84 K H -2.7201
85 N H -2.1223
86 N H -1.4503
87 L H 0.0000
88 Y H -0.4754
89 L H 0.0000
90 Q H -1.0227
91 M H 0.0000
92 N H -1.6280
93 S H -1.5286
94 L H 0.0000
95 R H -2.9207
96 A H -2.0205
97 E H -2.3875
98 D H 0.0000
99 T H -0.5483
100 A H 0.0000
101 L H 0.5230
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 N H 0.0000
107 R H 0.0000
108 Y H 0.1425
109 G H -0.8008
110 E H -1.7937
113 A H 0.0000
114 W H 0.0000
115 F H 0.0000
116 A H 0.2829
117 Y H 0.0071
118 W H -0.3722
119 G H 0.0000
120 Q H -1.3448
121 G H -0.4807
122 T H 0.2683
123 L H 1.1359
124 V H 0.0000
125 T H 0.1581
126 V H 0.0000
127 S H -0.6465
128 S H -0.5708
1 D L -2.2780
2 I L 0.0000
3 Q L -2.1182
4 M L 0.0000
5 T L -1.1839
6 Q L 0.0000
7 S L -0.5852
8 P L -0.5036
9 S L -0.6517
10 S L -0.9793
11 M L -0.8189
12 S L -1.0703
13 A L 0.0000
14 S L -0.7984
15 V L 0.1443
16 G L -0.7187
17 D L -1.6386
18 R L -2.3138
19 V L 0.0000
20 T L -0.6427
21 F L 0.0000
22 T L -0.8213
23 C L 0.0000
24 R L -3.0160
25 A L 0.0000
26 S L -2.2212
27 Q L -2.8967
28 D L -3.2701
29 I L 0.0000
36 N L -2.3704
37 T L -1.5133
38 Y L -0.9994
39 L L 0.0000
40 S L 0.0000
41 W L 0.0000
42 F L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.8099
46 P L -1.3087
47 G L -1.7456
48 K L -2.6394
49 S L -1.6782
50 P L 0.0000
51 K L -1.5441
52 T L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.8684
56 R L -1.4999
57 A L 0.0000
65 N L -1.6895
66 R L -1.9701
67 L L -0.5068
68 V L -0.1119
69 S L -0.3538
70 G L -0.4595
71 V L 0.0000
72 P L -0.3574
74 S L -0.3681
75 R L -0.7753
76 F L 0.0000
77 S L -0.7660
78 G L -0.9328
79 S L -1.1247
80 G L -1.4169
83 S L -1.7677
84 G L -2.3030
85 Q L -2.8069
86 D L -2.5933
87 Y L 0.0000
88 T L -0.8112
89 L L 0.0000
90 T L -0.6208
91 I L 0.0000
92 S L -1.3224
93 S L -1.0922
94 L L 0.0000
95 Q L -0.9207
96 P L -1.1356
97 E L -1.7899
98 D L 0.0000
99 M L -0.9196
100 A L 0.0000
101 T L -0.8039
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 L L 0.0000
106 Q L 0.0000
107 Y L -0.6487
108 D L -1.5009
109 E L -1.3166
114 F L -0.3500
115 P L -0.6231
116 L L 0.0000
117 T L -0.8106
118 F L -0.2801
119 G L -0.6188
120 A L -0.6178
121 G L 0.0000
122 T L 0.0000
123 K L -1.5027
124 L L 0.0000
125 E L -1.6897
126 L L -0.9717
127 K L -1.5837
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Laboratory of Theory of Biopolymers 2018