Project name: query_structure

Status: done

Started: 2026-03-16 23:45:44
Settings
Chain sequence(s) A: GTIFDCGETCFLGTCYTAGCSCGNWGLCYGTNG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:06)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:07)
Show buried residues

Minimal score value
-1.9884
Maximal score value
2.6801
Average score
0.3453
Total score value
11.3954

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.0406
2 T A 0.0381
3 I A 1.0811
4 F A 1.2302
5 D A -1.0253
6 C A -0.0556
7 G A -0.1036
8 E A 0.2362
9 T A 1.1151
10 C A 0.0000
11 F A 2.6801
12 L A 2.3771
13 G A 1.0162
14 T A 1.0227
15 C A 1.1268
16 Y A 1.2375
17 T A 0.3290
18 A A 0.0932
19 G A -0.7817
20 C A -0.2184
21 S A 0.0999
22 C A 0.9471
23 G A 0.3573
24 N A -0.4130
25 W A 1.0490
26 G A 1.3623
27 L A 1.4609
28 C A 0.0000
29 Y A 0.5218
30 G A 0.0000
31 T A -1.1129
32 N A -1.9884
33 G A -1.2467
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Laboratory of Theory of Biopolymers 2018