| Chain sequence(s) |
A: DIVLNQSPALMSASPGEKVTMTCSASSSVSYMYWYQQKPRSSPKPWIYLTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCQQWISNPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
B: EVQLQQSGPDLVKPGASVKISCKASGYSFTGYYMHWVKQSHGKSLEWIGRVNPNNGGTDYNQKFKGKAILTVDKSSTSAYMELRSLTPEDSEVYYCARGDFALVYWGQGTLVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:08)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:08)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:08)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:08)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:08)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:06)
[INFO] Main: Simulation completed successfully. (00:04:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.5740 | |
| 2 | I | A | 0.0408 | |
| 3 | V | A | 0.9621 | |
| 4 | L | A | 0.0000 | |
| 5 | N | A | -1.0541 | |
| 6 | Q | A | 0.0000 | |
| 7 | S | A | -0.3440 | |
| 8 | P | A | 0.0885 | |
| 9 | A | A | 0.3541 | |
| 10 | L | A | 1.3234 | |
| 11 | M | A | 0.5432 | |
| 12 | S | A | -0.3278 | |
| 13 | A | A | 0.0000 | |
| 14 | S | A | -1.7249 | |
| 15 | P | A | -1.9042 | |
| 16 | G | A | -2.0184 | |
| 17 | E | A | -2.7731 | |
| 18 | K | A | -2.7613 | |
| 19 | V | A | 0.0000 | |
| 20 | T | A | -0.6223 | |
| 21 | M | A | 0.0000 | |
| 22 | T | A | -0.4523 | |
| 23 | C | A | 0.0000 | |
| 24 | S | A | -0.5751 | |
| 25 | A | A | 0.0000 | |
| 26 | S | A | -0.1698 | |
| 27 | S | A | -0.1140 | |
| 28 | S | A | -0.1095 | |
| 29 | V | A | 0.0000 | |
| 30 | S | A | 0.4479 | |
| 31 | Y | A | 1.2721 | |
| 32 | M | A | 0.0000 | |
| 33 | Y | A | 0.0000 | |
| 34 | W | A | 0.0000 | |
| 35 | Y | A | 0.0000 | |
| 36 | Q | A | 0.0000 | |
| 37 | Q | A | 0.0000 | |
| 38 | K | A | -1.7765 | |
| 39 | P | A | -1.8575 | |
| 40 | R | A | -2.4901 | |
| 41 | S | A | -1.6753 | |
| 42 | S | A | -1.1761 | |
| 43 | P | A | 0.0000 | |
| 44 | K | A | -0.8883 | |
| 45 | P | A | 0.0000 | |
| 46 | W | A | -0.0534 | |
| 47 | I | A | 0.0000 | |
| 48 | Y | A | 1.1984 | |
| 49 | L | A | 1.1950 | |
| 50 | T | A | 0.0000 | |
| 51 | S | A | -0.1087 | |
| 52 | N | A | -0.2297 | |
| 53 | L | A | 0.1650 | |
| 54 | A | A | 0.0444 | |
| 55 | S | A | -0.2973 | |
| 56 | G | A | -0.4799 | |
| 57 | V | A | 0.0000 | |
| 58 | P | A | -0.2186 | |
| 59 | A | A | -0.1792 | |
| 60 | R | A | -0.7775 | |
| 61 | F | A | 0.0000 | |
| 62 | S | A | -0.4296 | |
| 63 | G | A | -0.2825 | |
| 64 | S | A | -0.4744 | |
| 65 | G | A | -0.5663 | |
| 66 | S | A | -0.4344 | |
| 67 | G | A | -0.4180 | |
| 68 | T | A | -0.4275 | |
| 69 | S | A | -0.6422 | |
| 70 | Y | A | 0.0000 | |
| 71 | S | A | -0.3765 | |
| 72 | L | A | 0.0000 | |
| 73 | T | A | -0.6091 | |
| 74 | I | A | 0.0000 | |
| 75 | S | A | -1.5605 | |
| 76 | S | A | -1.9307 | |
| 77 | M | A | 0.0000 | |
| 78 | E | A | -2.5826 | |
| 79 | A | A | -2.3000 | |
| 80 | E | A | -2.6051 | |
| 81 | D | A | 0.0000 | |
| 82 | A | A | -1.2875 | |
| 83 | A | A | 0.0000 | |
| 84 | T | A | -0.5498 | |
| 85 | Y | A | 0.0000 | |
| 86 | Y | A | 0.0000 | |
| 87 | C | A | 0.0000 | |
| 88 | Q | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | W | A | 0.0000 | |
| 91 | I | A | 1.4741 | |
| 92 | S | A | -0.2067 | |
| 93 | N | A | -1.4583 | |
| 94 | P | A | 0.0000 | |
| 95 | Y | A | 0.0669 | |
| 96 | T | A | -0.0296 | |
| 97 | F | A | 0.0000 | |
| 98 | G | A | 0.0000 | |
| 99 | G | A | -1.0877 | |
| 100 | G | A | -0.7757 | |
| 101 | T | A | 0.0000 | |
| 102 | K | A | -0.3507 | |
| 103 | L | A | 0.0000 | |
| 104 | E | A | -0.7264 | |
| 105 | I | A | 0.0000 | |
| 106 | K | A | -1.8842 | |
| 107 | R | A | -1.7393 | |
| 108 | A | A | -1.3708 | |
| 109 | D | A | -2.4708 | |
| 110 | A | A | -1.3980 | |
| 111 | A | A | -0.6795 | |
| 112 | P | A | 0.0000 | |
| 113 | T | A | -0.1069 | |
| 114 | V | A | 0.0000 | |
| 115 | S | A | 0.0121 | |
| 116 | I | A | 0.0500 | |
| 117 | F | A | 0.0000 | |
| 118 | P | A | 0.0000 | |
| 119 | P | A | 0.0000 | |
| 120 | S | A | 0.0000 | |
| 121 | S | A | -0.8015 | |
| 122 | E | A | -0.9203 | |
| 123 | Q | A | 0.0000 | |
| 124 | L | A | -0.8436 | |
| 125 | T | A | -0.5723 | |
| 126 | S | A | -0.6593 | |
| 127 | G | A | -1.0515 | |
| 128 | G | A | -0.9280 | |
| 129 | A | A | 0.0000 | |
| 130 | S | A | 0.0000 | |
| 131 | V | A | 0.0000 | |
| 132 | V | A | 0.0000 | |
| 133 | C | A | 0.0000 | |
| 134 | F | A | 0.0000 | |
| 135 | L | A | 0.0000 | |
| 136 | N | A | 0.0000 | |
| 137 | N | A | -0.7684 | |
| 138 | F | A | 0.0000 | |
| 139 | Y | A | 0.0000 | |
| 140 | P | A | -2.2519 | |
| 141 | K | A | -2.7460 | |
| 142 | D | A | -2.8820 | |
| 143 | I | A | -1.8594 | |
| 144 | N | A | -1.9944 | |
| 145 | V | A | -0.7411 | |
| 146 | K | A | -1.7452 | |
| 147 | W | A | 0.0000 | |
| 148 | K | A | -2.3114 | |
| 149 | I | A | 0.0000 | |
| 150 | D | A | -2.6540 | |
| 151 | G | A | -1.9654 | |
| 152 | S | A | -2.1273 | |
| 153 | E | A | -3.1709 | |
| 154 | R | A | -2.6410 | |
| 155 | Q | A | -2.5062 | |
| 156 | N | A | -2.0475 | |
| 157 | G | A | -0.8445 | |
| 158 | V | A | -0.4632 | |
| 159 | L | A | -0.0099 | |
| 160 | N | A | 0.0728 | |
| 161 | S | A | 0.3111 | |
| 162 | W | A | 0.3391 | |
| 163 | T | A | -0.4838 | |
| 164 | D | A | -1.6109 | |
| 165 | Q | A | 0.0000 | |
| 166 | D | A | -1.7047 | |
| 167 | S | A | -2.0915 | |
| 168 | K | A | -2.4893 | |
| 169 | D | A | -1.6505 | |
| 170 | S | A | 0.0000 | |
| 171 | T | A | 0.0000 | |
| 172 | Y | A | 0.0000 | |
| 173 | S | A | 0.0000 | |
| 174 | M | A | 0.0000 | |
| 175 | S | A | 0.0000 | |
| 176 | S | A | 0.0000 | |
| 177 | T | A | 0.0000 | |
| 178 | L | A | 0.0000 | |
| 179 | T | A | -0.2320 | |
| 180 | L | A | 0.0000 | |
| 181 | T | A | -1.3611 | |
| 182 | K | A | -2.3401 | |
| 183 | D | A | -3.2175 | |
| 184 | E | A | -2.5134 | |
| 185 | Y | A | 0.0000 | |
| 186 | E | A | -3.4801 | |
| 187 | R | A | -3.5337 | |
| 188 | H | A | -2.7264 | |
| 189 | N | A | -2.5319 | |
| 190 | S | A | -1.7671 | |
| 191 | Y | A | 0.0000 | |
| 192 | T | A | -1.0232 | |
| 193 | C | A | 0.0000 | |
| 194 | E | A | -0.4718 | |
| 195 | A | A | 0.0000 | |
| 196 | T | A | -1.0594 | |
| 197 | H | A | 0.0000 | |
| 198 | K | A | -2.6076 | |
| 199 | T | A | -1.3110 | |
| 200 | S | A | -0.7534 | |
| 201 | T | A | -0.6062 | |
| 202 | S | A | -0.3748 | |
| 203 | P | A | -0.3887 | |
| 204 | I | A | 0.5067 | |
| 205 | V | A | 0.5856 | |
| 206 | K | A | -0.1677 | |
| 207 | S | A | -0.3955 | |
| 208 | F | A | 0.0000 | |
| 209 | N | A | -1.9924 | |
| 210 | R | A | -2.4130 | |
| 211 | N | A | -2.6212 | |
| 212 | E | A | -2.6876 | |
| 213 | C | A | -1.4084 | |
| 1 | E | B | -2.1312 | |
| 2 | V | B | -1.1991 | |
| 3 | Q | B | -2.1008 | |
| 4 | L | B | 0.0000 | |
| 5 | Q | B | -2.1425 | |
| 6 | Q | B | 0.0000 | |
| 7 | S | B | -1.0768 | |
| 8 | G | B | -1.0015 | |
| 9 | P | B | -0.6264 | |
| 10 | D | B | -1.0172 | |
| 11 | L | B | -0.6422 | |
| 12 | V | B | -0.8796 | |
| 13 | K | B | -2.0357 | |
| 14 | P | B | -1.5904 | |
| 15 | G | B | -1.3378 | |
| 16 | A | B | -1.1637 | |
| 17 | S | B | -1.4307 | |
| 18 | V | B | 0.0000 | |
| 19 | K | B | -1.6002 | |
| 20 | I | B | 0.0000 | |
| 21 | S | B | -0.7623 | |
| 22 | C | B | 0.0000 | |
| 23 | K | B | -1.5034 | |
| 24 | A | B | 0.0000 | |
| 25 | S | B | -1.2872 | |
| 26 | G | B | -1.3051 | |
| 27 | Y | B | -0.5665 | |
| 28 | S | B | -0.2354 | |
| 29 | F | B | 0.0000 | |
| 30 | T | B | -1.1164 | |
| 31 | G | B | -0.6853 | |
| 32 | Y | B | -0.1190 | |
| 33 | Y | B | -0.2632 | |
| 34 | M | B | 0.0000 | |
| 35 | H | B | 0.0000 | |
| 36 | W | B | 0.0000 | |
| 37 | V | B | 0.0000 | |
| 38 | K | B | -0.6232 | |
| 39 | Q | B | 0.0000 | |
| 40 | S | B | -1.6262 | |
| 41 | H | B | -1.8828 | |
| 42 | G | B | -2.1026 | |
| 43 | K | B | -2.5508 | |
| 44 | S | B | -1.6406 | |
| 45 | L | B | 0.0000 | |
| 46 | E | B | -0.9224 | |
| 47 | W | B | 0.0000 | |
| 48 | I | B | 0.0000 | |
| 49 | G | B | 0.0000 | |
| 50 | R | B | -0.5996 | |
| 51 | V | B | 0.0000 | |
| 52 | N | B | -1.1931 | |
| 53 | P | B | 0.0000 | |
| 54 | N | B | -2.3840 | |
| 55 | N | B | -2.3338 | |
| 56 | G | B | -1.6739 | |
| 57 | G | B | -1.2319 | |
| 58 | T | B | -0.6957 | |
| 59 | D | B | -1.3282 | |
| 60 | Y | B | -1.4551 | |
| 61 | N | B | 0.0000 | |
| 62 | Q | B | -3.0986 | |
| 63 | K | B | -2.9014 | |
| 64 | F | B | 0.0000 | |
| 65 | K | B | -2.8131 | |
| 66 | G | B | -1.9868 | |
| 67 | K | B | -1.8810 | |
| 68 | A | B | 0.0000 | |
| 69 | I | B | -0.1908 | |
| 70 | L | B | 0.0000 | |
| 71 | T | B | -0.3172 | |
| 72 | V | B | -1.0356 | |
| 73 | D | B | -1.6690 | |
| 74 | K | B | -2.3994 | |
| 75 | S | B | -1.2184 | |
| 76 | S | B | -1.0275 | |
| 77 | T | B | -1.1388 | |
| 78 | S | B | 0.0000 | |
| 79 | A | B | 0.0000 | |
| 80 | Y | B | -0.2239 | |
| 81 | M | B | 0.0000 | |
| 82 | E | B | -1.0859 | |
| 83 | L | B | 0.0000 | |
| 84 | R | B | -1.9553 | |
| 85 | S | B | -1.4495 | |
| 86 | L | B | 0.0000 | |
| 87 | T | B | -1.4286 | |
| 88 | P | B | -1.5292 | |
| 89 | E | B | -2.0448 | |
| 90 | D | B | 0.0000 | |
| 91 | S | B | -0.8673 | |
| 92 | E | B | -0.6472 | |
| 93 | V | B | -0.1699 | |
| 94 | Y | B | 0.0000 | |
| 95 | Y | B | 0.0000 | |
| 96 | C | B | 0.0000 | |
| 97 | A | B | 0.0000 | |
| 98 | R | B | 0.0000 | |
| 99 | G | B | 0.0000 | |
| 100 | D | B | -0.8808 | |
| 101 | F | B | 1.0039 | |
| 102 | A | B | 0.6990 | |
| 103 | L | B | 0.0000 | |
| 104 | V | B | 0.8168 | |
| 105 | Y | B | 0.3652 | |
| 106 | W | B | -0.3446 | |
| 107 | G | B | 0.0000 | |
| 108 | Q | B | -1.7643 | |
| 109 | G | B | -0.9047 | |
| 110 | T | B | 0.0000 | |
| 111 | L | B | 0.0907 | |
| 112 | V | B | 0.0000 | |
| 113 | T | B | -0.6458 | |
| 114 | V | B | 0.0000 | |
| 115 | S | B | -1.4566 | |
| 116 | S | B | -1.4107 | |
| 117 | A | B | -1.5153 | |
| 118 | K | B | -2.1213 | |
| 119 | T | B | -1.0566 | |
| 120 | T | B | -0.6833 | |
| 121 | P | B | -0.6391 | |
| 122 | P | B | 0.0000 | |
| 123 | S | B | -0.2691 | |
| 124 | V | B | 0.0000 | |
| 125 | Y | B | -0.3581 | |
| 126 | P | B | 0.0000 | |
| 127 | L | B | 0.0000 | |
| 128 | A | B | 0.0000 | |
| 129 | P | B | -0.0893 | |
| 130 | G | B | -0.8512 | |
| 131 | S | B | -0.9020 | |
| 132 | A | B | -0.7283 | |
| 133 | A | B | -0.7395 | |
| 134 | Q | B | -1.5754 | |
| 135 | T | B | -1.2261 | |
| 136 | N | B | -1.6021 | |
| 137 | S | B | -0.8544 | |
| 138 | M | B | -0.2469 | |
| 139 | V | B | -0.2295 | |
| 140 | T | B | 0.0458 | |
| 141 | L | B | 0.0000 | |
| 142 | G | B | 0.0000 | |
| 143 | C | B | 0.0000 | |
| 144 | L | B | 0.0000 | |
| 145 | V | B | 0.0000 | |
| 146 | K | B | -0.1329 | |
| 147 | G | B | -0.2384 | |
| 148 | Y | B | 0.0000 | |
| 149 | F | B | 0.0000 | |
| 150 | P | B | 0.0000 | |
| 151 | E | B | -0.2218 | |
| 152 | P | B | -0.2981 | |
| 153 | V | B | -0.1872 | |
| 154 | T | B | -0.1768 | |
| 155 | V | B | -0.1876 | |
| 156 | T | B | -0.3335 | |
| 157 | W | B | 0.0000 | |
| 158 | N | B | -0.9452 | |
| 159 | S | B | -0.7415 | |
| 160 | G | B | -0.5424 | |
| 161 | S | B | -0.4462 | |
| 162 | L | B | -0.1530 | |
| 163 | S | B | -0.3425 | |
| 164 | S | B | -0.5034 | |
| 165 | G | B | -0.2862 | |
| 166 | V | B | 0.1297 | |
| 167 | H | B | -0.0630 | |
| 168 | T | B | 0.1230 | |
| 169 | F | B | 0.0000 | |
| 170 | P | B | 0.0558 | |
| 171 | A | B | 0.3710 | |
| 172 | V | B | 0.5265 | |
| 173 | L | B | 0.5105 | |
| 174 | Q | B | -0.9294 | |
| 175 | S | B | -1.1851 | |
| 176 | D | B | -1.8753 | |
| 177 | L | B | -0.5362 | |
| 178 | Y | B | 0.1834 | |
| 179 | T | B | 0.2688 | |
| 180 | L | B | 0.0000 | |
| 181 | S | B | 0.0000 | |
| 182 | S | B | 0.0000 | |
| 183 | S | B | 0.0000 | |
| 184 | V | B | 0.0000 | |
| 185 | T | B | 0.0833 | |
| 186 | V | B | 0.0000 | |
| 187 | P | B | -0.2622 | |
| 188 | S | B | -0.7268 | |
| 189 | S | B | -0.5754 | |
| 190 | T | B | -0.8207 | |
| 191 | W | B | -0.6170 | |
| 192 | P | B | -0.6552 | |
| 193 | S | B | -1.2492 | |
| 194 | E | B | -2.0325 | |
| 195 | T | B | -1.0934 | |
| 196 | V | B | 0.0000 | |
| 197 | T | B | -1.2364 | |
| 198 | C | B | 0.0000 | |
| 199 | N | B | 0.0000 | |
| 200 | V | B | 0.0000 | |
| 201 | A | B | -0.8699 | |
| 202 | H | B | 0.0000 | |
| 203 | P | B | -0.8631 | |
| 204 | A | B | -0.4621 | |
| 205 | S | B | -0.5045 | |
| 206 | S | B | -0.7464 | |
| 207 | T | B | -0.9218 | |
| 208 | K | B | -1.9412 | |
| 209 | V | B | -1.4285 | |
| 210 | D | B | -2.4496 | |
| 211 | K | B | -1.5206 | |
| 212 | K | B | -1.5163 | |
| 213 | I | B | 0.0000 | |
| 214 | V | B | 0.7198 | |
| 215 | P | B | -0.1437 | |
| 216 | R | B | -0.6973 | |
| 217 | D | B | -1.5760 | |
| 218 | C | B | -0.6733 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine