Project name: CMProt B1 Model1

Status: done

Started: 2026-02-12 14:22:27
Settings
Chain sequence(s) A: SSLFTFLCLAVFINGCLSQI
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:07)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:08)
Show buried residues

Minimal score value
0.0903
Maximal score value
4.5952
Average score
2.6828
Total score value
53.6567

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A 1.2138
2 S A 1.7273
3 L A 3.4586
4 F A 3.8333
5 T A 3.2742
6 F A 4.5952
7 L A 4.5012
8 C A 4.3005
9 L A 4.4798
10 A A 3.4221
11 V A 3.7312
12 F A 4.0424
13 I A 2.6620
14 N A 1.1161
15 G A 1.1527
16 C A 1.7189
17 L A 1.9305
18 S A 0.5623
19 Q A 0.0903
20 I A 1.8443
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Laboratory of Theory of Biopolymers 2018