Project name: ed005386669b2ef

Status: done

Started: 2025-06-03 05:10:02
Settings
Chain sequence(s) H: QVQLVQSGAEVKRPGASVKVSCKASGYTFTNDIIHWVRQAPGQRLEWMGWINAGYGNTQYSQNFQDRVSITRDTSASTAYMELISLRSEDTAVYYCAREPLWFGESSPHDYYGMDVWGQGTTVTVSS
L: AIQLTQSPSSLSASVGDRVTITCRASQGISSALAWYQQKPGKAPKLLIYDASSLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQFNSYPLTFGGGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:14)
Show buried residues

Minimal score value
-2.9931
Maximal score value
1.3442
Average score
-0.5566
Total score value
-130.2485

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.2903
2 V H -0.5244
3 Q H -0.6625
4 L H 0.0000
5 V H 0.7269
6 Q H 0.0000
7 S H -0.4558
8 G H -0.5572
9 A H -0.0244
11 E H -0.0220
12 V H 0.8956
13 K H -0.9902
14 R H -2.3271
15 P H -2.0357
16 G H -1.4084
17 A H -0.8331
18 S H -0.7319
19 V H 0.0000
20 K H -1.6950
21 V H 0.0000
22 S H -0.4464
23 C H 0.0000
24 K H -0.4082
25 A H 0.0000
26 S H -0.5280
27 G H -0.8180
28 Y H -0.2975
29 T H -0.2149
30 F H 0.0000
35 T H -0.3672
36 N H -0.3175
37 D H 0.0000
38 I H 0.0000
39 I H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H -0.5941
44 Q H -0.9628
45 A H -1.2418
46 P H -1.1650
47 G H -1.4220
48 Q H -2.2304
49 R H -2.1413
50 L H 0.0000
51 E H -1.1273
52 W H 0.0000
53 M H 0.0000
54 G H 0.0000
55 W H -0.2193
56 I H 0.0000
57 N H -0.3780
58 A H 0.0000
59 G H -0.1448
62 Y H 0.6686
63 G H -0.3844
64 N H -1.1084
65 T H -0.7060
66 Q H -0.8401
67 Y H -1.0660
68 S H 0.0000
69 Q H -2.5126
70 N H -2.5216
71 F H 0.0000
72 Q H -2.9038
74 D H -2.8008
75 R H -1.5275
76 V H 0.0000
77 S H -0.9844
78 I H 0.0000
79 T H -0.7808
80 R H -0.8286
81 D H -1.0416
82 T H -0.5022
83 S H -0.4936
84 A H -0.5133
85 S H -0.5861
86 T H 0.0000
87 A H 0.0000
88 Y H -0.6452
89 M H 0.0000
90 E H -1.2067
91 L H 0.0000
92 I H -0.3840
93 S H -0.9265
94 L H 0.0000
95 R H -2.9931
96 S H -2.3991
97 E H -2.5531
98 D H 0.0000
99 T H -0.9191
100 A H 0.0000
101 V H 0.1407
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H -0.2466
107 E H 0.0000
108 P H 0.0000
109 L H 0.5182
110 W H 0.9160
111 F H 1.3442
111A G H -0.3837
111B E H -1.6798
111C S H -1.1704
112D S H -1.0539
112C P H -0.3536
112B H H -1.0361
112A D H -1.4901
112 Y H 0.0000
113 Y H 0.0000
114 G H 0.0000
115 M H 0.0000
116 D H -0.3549
117 V H -0.2422
118 W H 0.0000
119 G H 0.0000
120 Q H -1.2413
121 G H -0.6984
122 T H 0.0000
123 T H 0.0485
124 V H 0.0000
125 T H -0.3070
126 V H 0.0000
127 S H -1.0229
128 S H -0.9517
1 A L -0.4490
2 I L 0.0000
3 Q L -1.7804
4 L L 0.0000
5 T L -1.2924
6 Q L 0.0000
7 S L -0.6354
8 P L -0.5300
9 S L -0.7012
10 S L -0.8478
11 L L -0.4287
12 S L -0.5195
13 A L 0.0000
14 S L 0.0311
15 V L 0.8173
16 G L -0.4513
17 D L -1.4821
18 R L -2.1785
19 V L 0.0000
20 T L -0.5855
21 I L 0.0000
22 T L -0.8405
23 C L 0.0000
24 R L -2.8339
25 A L 0.0000
26 S L -1.7881
27 Q L -2.2214
28 G L -1.7402
29 I L 0.0000
36 S L -1.0701
37 S L -1.0146
38 A L -0.9515
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.8295
44 Q L 0.0000
45 K L -1.7037
46 P L -1.2700
47 G L -1.6258
48 K L -2.5570
49 A L -1.5348
50 P L 0.0000
51 K L -1.2372
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.1937
56 D L -0.8382
57 A L 0.0000
65 S L -0.4318
66 S L -0.0862
67 L L 0.2580
68 E L -0.2743
69 S L -0.3502
70 G L -0.4949
71 V L -0.2749
72 P L -0.3065
74 S L -0.3854
75 R L -0.7158
76 F L 0.0000
77 S L -0.2765
78 G L -0.3104
79 S L -0.7047
80 G L -1.1770
83 S L -1.2094
84 G L -1.3586
85 T L -1.8681
86 D L -2.2620
87 F L 0.0000
88 T L -0.7418
89 L L 0.0000
90 T L 0.0000
91 I L 0.0000
92 S L -1.3279
93 S L -1.0569
94 L L 0.0000
95 Q L -0.8248
96 P L -0.4696
97 E L -1.6243
98 D L 0.0000
99 F L -0.2143
100 A L 0.0000
101 T L -0.8428
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 F L 0.0000
108 N L -1.3191
109 S L -0.4214
114 Y L 0.2310
115 P L -0.2506
116 L L 0.0000
117 T L -0.5760
118 F L 0.0000
119 G L 0.0000
120 G L -1.2542
121 G L -1.0718
122 T L 0.0000
123 K L -1.2527
124 V L 0.0000
125 E L -0.3311
126 I L 1.0406
127 K L -0.7435
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Laboratory of Theory of Biopolymers 2018