| Chain sequence(s) |
A: DSNTVSSFQVDCFLWHVRKRFADQELGDAPFLDRLRADQASLRGRGSTLGLDIETATRAGKQIVERILEEESDEALKMTIASVPASRYLTDMTLEEMSRDWFMLMPKQKVAGSLCIRMDQAIMDKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAIGVLIGGLEWNDNTVRVSETLQRFAW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | IM81A,EK70A |
| Energy difference between WT (input) and mutated protein (by FoldX) | -0.34789 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] FoldX: Building mutant model (00:02:09)
[INFO] FoldX: Starting FoldX energy minimalization (00:03:20)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:59)
[INFO] Main: Simulation completed successfully. (00:05:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | D | A | -2.2157 | |
| 3 | S | A | -1.5513 | |
| 4 | N | A | -1.8760 | |
| 5 | T | A | -1.0781 | |
| 6 | V | A | -0.2343 | |
| 7 | S | A | -0.6921 | |
| 8 | S | A | -0.9797 | |
| 9 | F | A | 0.0000 | |
| 10 | Q | A | 0.0000 | |
| 11 | V | A | -0.6700 | |
| 12 | D | A | -1.6393 | |
| 13 | C | A | 0.0000 | |
| 14 | F | A | -0.7999 | |
| 15 | L | A | -0.5455 | |
| 16 | W | A | -1.3023 | |
| 17 | H | A | -1.2761 | |
| 18 | V | A | -0.9305 | |
| 19 | R | A | -1.6226 | |
| 20 | K | A | -2.9638 | |
| 21 | R | A | -2.9668 | |
| 22 | F | A | -1.3673 | |
| 23 | A | A | -2.2704 | |
| 24 | D | A | -3.4111 | |
| 25 | Q | A | -2.7536 | |
| 26 | E | A | -2.6903 | |
| 27 | L | A | -0.4752 | |
| 28 | G | A | -1.4753 | |
| 29 | D | A | -1.8309 | |
| 30 | A | A | -1.4374 | |
| 31 | P | A | -1.7407 | |
| 32 | F | A | -1.5957 | |
| 33 | L | A | -2.1821 | |
| 34 | D | A | -3.4388 | |
| 35 | R | A | -3.3334 | |
| 36 | L | A | 0.0000 | |
| 37 | R | A | -3.2610 | |
| 38 | A | A | -2.2421 | |
| 39 | D | A | -2.7077 | |
| 40 | Q | A | -2.7698 | |
| 41 | A | A | -1.9720 | |
| 42 | S | A | -1.8519 | |
| 43 | L | A | 0.0000 | |
| 44 | R | A | -2.9720 | |
| 45 | G | A | -2.2863 | |
| 46 | R | A | -2.7878 | |
| 47 | G | A | 0.0000 | |
| 48 | S | A | -1.7345 | |
| 49 | T | A | -1.1476 | |
| 50 | L | A | -0.3389 | |
| 51 | G | A | -0.8616 | |
| 52 | L | A | -1.1611 | |
| 53 | D | A | -2.5259 | |
| 54 | I | A | -2.0345 | |
| 55 | E | A | -2.2014 | |
| 56 | T | A | -1.3757 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | -1.3848 | |
| 59 | R | A | -1.0756 | |
| 60 | A | A | 0.0000 | |
| 61 | G | A | 0.0000 | |
| 62 | K | A | -1.5003 | |
| 63 | Q | A | -1.1675 | |
| 64 | I | A | -0.7584 | |
| 65 | V | A | 0.0000 | |
| 66 | E | A | -2.2548 | |
| 67 | R | A | -2.6846 | |
| 68 | I | A | -0.9406 | |
| 69 | L | A | -1.3220 | |
| 70 | K | A | -3.1415 | mutated: EK70A |
| 71 | E | A | -3.2087 | |
| 72 | E | A | -2.7821 | |
| 73 | S | A | -2.7584 | |
| 74 | D | A | -3.0375 | |
| 75 | E | A | -2.7211 | |
| 76 | A | A | -1.1750 | |
| 77 | L | A | -0.2533 | |
| 78 | K | A | -1.5379 | |
| 79 | M | A | -0.0490 | |
| 80 | T | A | 0.3524 | |
| 81 | M | A | 1.2378 | mutated: IM81A |
| 82 | A | A | 1.1127 | |
| 83 | S | A | 0.9139 | |
| 84 | V | A | 1.7770 | |
| 85 | P | A | 0.7372 | |
| 86 | A | A | 0.1875 | |
| 87 | S | A | -0.2856 | |
| 88 | R | A | -0.8888 | |
| 89 | Y | A | 0.6395 | |
| 90 | L | A | 0.5066 | |
| 91 | T | A | 0.5310 | |
| 92 | D | A | -0.3615 | |
| 93 | M | A | 0.0000 | |
| 94 | T | A | -0.0986 | |
| 95 | L | A | 0.2431 | |
| 96 | E | A | -1.6609 | |
| 97 | E | A | -1.5396 | |
| 98 | M | A | -0.7186 | |
| 99 | S | A | -1.6154 | |
| 100 | R | A | -2.9863 | |
| 101 | D | A | -2.2267 | |
| 102 | W | A | 0.0621 | |
| 103 | F | A | 2.1165 | |
| 104 | M | A | 1.6428 | |
| 105 | L | A | 2.0724 | |
| 106 | M | A | 1.0066 | |
| 107 | P | A | -0.3305 | |
| 108 | K | A | -2.3316 | |
| 109 | Q | A | -2.3152 | |
| 110 | K | A | -1.2096 | |
| 111 | V | A | 0.9063 | |
| 112 | A | A | 0.3425 | |
| 113 | G | A | -0.3734 | |
| 114 | S | A | 0.3245 | |
| 115 | L | A | 0.0000 | |
| 116 | C | A | 0.1249 | |
| 117 | I | A | 0.0000 | |
| 118 | R | A | -1.4463 | |
| 119 | M | A | -0.7650 | |
| 120 | D | A | 0.0000 | |
| 121 | Q | A | -0.1940 | |
| 122 | A | A | 0.0303 | |
| 123 | I | A | -0.3515 | |
| 124 | M | A | -1.1428 | |
| 125 | D | A | -2.8743 | |
| 126 | K | A | -3.0715 | |
| 127 | N | A | -3.1630 | |
| 128 | I | A | 0.0000 | |
| 129 | I | A | -0.8130 | |
| 130 | L | A | 0.0000 | |
| 131 | K | A | -0.6756 | |
| 132 | A | A | 0.0000 | |
| 133 | N | A | 0.0000 | |
| 134 | F | A | 0.0000 | |
| 135 | S | A | 0.0000 | |
| 136 | V | A | 0.0000 | |
| 137 | I | A | -0.3098 | |
| 138 | F | A | 0.1273 | |
| 139 | D | A | -2.0934 | |
| 140 | R | A | -2.6333 | |
| 141 | L | A | 0.0000 | |
| 142 | E | A | -2.4274 | |
| 143 | T | A | -1.0499 | |
| 144 | L | A | 0.0000 | |
| 145 | I | A | 1.2057 | |
| 146 | L | A | 0.5578 | |
| 147 | L | A | 0.0000 | |
| 148 | R | A | 0.0000 | |
| 149 | A | A | 0.0000 | |
| 150 | F | A | 0.0000 | |
| 151 | T | A | 0.0000 | |
| 152 | E | A | -3.2881 | |
| 153 | E | A | -3.1476 | |
| 154 | G | A | -1.8199 | |
| 155 | A | A | -1.3951 | |
| 156 | I | A | -0.2387 | |
| 157 | V | A | 0.0000 | |
| 158 | G | A | 0.0000 | |
| 159 | E | A | 0.0000 | |
| 160 | I | A | 0.0000 | |
| 161 | S | A | 0.4188 | |
| 162 | P | A | 0.4232 | |
| 163 | L | A | 0.4931 | |
| 164 | P | A | -0.0337 | |
| 165 | S | A | 0.0752 | |
| 166 | L | A | 0.2854 | |
| 167 | P | A | -0.0812 | |
| 168 | G | A | -0.1949 | |
| 169 | H | A | -0.9515 | |
| 170 | T | A | -1.6552 | |
| 171 | D | A | -2.4670 | |
| 172 | E | A | -3.0889 | |
| 173 | D | A | -2.1400 | |
| 174 | V | A | 0.0000 | |
| 175 | K | A | -1.9979 | |
| 176 | N | A | -2.1250 | |
| 177 | A | A | 0.0000 | |
| 178 | I | A | 0.0000 | |
| 179 | G | A | -0.5633 | |
| 180 | V | A | -0.3066 | |
| 181 | L | A | 0.0000 | |
| 182 | I | A | -0.1581 | |
| 183 | G | A | -0.0000 | |
| 184 | G | A | -0.3396 | |
| 185 | L | A | 0.0000 | |
| 186 | E | A | -1.3412 | |
| 187 | W | A | 0.0231 | |
| 188 | N | A | -1.2732 | |
| 189 | D | A | -2.5945 | |
| 190 | N | A | 0.0000 | |
| 191 | T | A | -1.8195 | |
| 192 | V | A | 0.0000 | |
| 193 | R | A | -2.2191 | |
| 194 | V | A | 0.0000 | |
| 195 | S | A | 0.0000 | |
| 196 | E | A | -3.0428 | |
| 197 | T | A | -1.8816 | |
| 198 | L | A | 0.0000 | |
| 199 | Q | A | -2.5968 | |
| 200 | R | A | -3.1303 | |
| 201 | F | A | -1.8205 | |
| 202 | A | A | -1.4348 | |
| 203 | W | A | -0.2673 |