| Chain sequence(s) |
A: MSHHHHHHSGSAEEEKKKYLEEALEVVKEMRKLYEAGKPWEEMLALMPKLLIALRKAFPERKRIVIHHNRNEPEEFIERLEKFIEELMKNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:41)
[INFO] Main: Simulation completed successfully. (00:02:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5531 | |
| 2 | S | A | -0.6084 | |
| 3 | H | A | -1.7320 | |
| 4 | H | A | -2.3403 | |
| 5 | H | A | -2.7248 | |
| 6 | H | A | -2.7781 | |
| 7 | H | A | -2.5578 | |
| 8 | H | A | -2.3437 | |
| 9 | S | A | -2.0022 | |
| 10 | G | A | -2.4604 | |
| 11 | S | A | -2.5073 | |
| 12 | A | A | -2.7219 | |
| 13 | E | A | -3.9253 | |
| 14 | E | A | -4.3714 | |
| 15 | E | A | -4.3717 | |
| 16 | K | A | -4.0494 | |
| 17 | K | A | -4.1574 | |
| 18 | K | A | -4.5016 | |
| 19 | Y | A | -3.4492 | |
| 20 | L | A | 0.0000 | |
| 21 | E | A | -3.9593 | |
| 22 | E | A | -3.8597 | |
| 23 | A | A | 0.0000 | |
| 24 | L | A | -2.6335 | |
| 25 | E | A | -3.3996 | |
| 26 | V | A | 0.0000 | |
| 27 | V | A | 0.0000 | |
| 28 | K | A | -2.7415 | |
| 29 | E | A | -2.7216 | |
| 30 | M | A | 0.0000 | |
| 31 | R | A | -2.8961 | |
| 32 | K | A | -3.0835 | |
| 33 | L | A | -2.2247 | |
| 34 | Y | A | -2.2141 | |
| 35 | E | A | -2.8838 | |
| 36 | A | A | -1.7397 | |
| 37 | G | A | -1.6948 | |
| 38 | K | A | -2.3950 | |
| 39 | P | A | -1.5866 | |
| 40 | W | A | -1.9159 | |
| 41 | E | A | -2.3737 | |
| 42 | E | A | -2.0412 | |
| 43 | M | A | 0.0000 | |
| 44 | L | A | -1.0438 | |
| 45 | A | A | -0.8061 | |
| 46 | L | A | -0.8183 | |
| 47 | M | A | 0.0000 | |
| 48 | P | A | -0.2294 | |
| 49 | K | A | -1.3088 | |
| 50 | L | A | 0.0000 | |
| 51 | L | A | 0.5354 | |
| 52 | I | A | 0.4683 | |
| 53 | A | A | 0.0000 | |
| 54 | L | A | 0.0000 | |
| 55 | R | A | -2.7113 | |
| 56 | K | A | -2.4731 | |
| 57 | A | A | 0.0000 | |
| 58 | F | A | 0.0000 | |
| 59 | P | A | -2.9219 | |
| 60 | E | A | -3.5118 | |
| 61 | R | A | -3.7659 | |
| 62 | K | A | -3.7832 | |
| 63 | R | A | -2.8686 | |
| 64 | I | A | -0.2618 | |
| 65 | V | A | 1.3463 | |
| 66 | I | A | 0.2979 | |
| 67 | H | A | -1.4735 | |
| 68 | H | A | -2.2657 | |
| 69 | N | A | -3.7045 | |
| 70 | R | A | -4.1400 | |
| 71 | N | A | -3.6474 | |
| 72 | E | A | -4.0015 | |
| 73 | P | A | -3.4589 | |
| 74 | E | A | -3.8511 | |
| 75 | E | A | -3.9168 | |
| 76 | F | A | 0.0000 | |
| 77 | I | A | 0.0000 | |
| 78 | E | A | -3.0220 | |
| 79 | R | A | -3.3609 | |
| 80 | L | A | 0.0000 | |
| 81 | E | A | -2.5391 | |
| 82 | K | A | -2.9037 | |
| 83 | F | A | -1.3257 | |
| 84 | I | A | 0.0000 | |
| 85 | E | A | -3.1005 | |
| 86 | E | A | -3.2601 | |
| 87 | L | A | -2.1161 | |
| 88 | M | A | -2.8704 | |
| 89 | K | A | -3.2192 | |
| 90 | N | A | -2.6728 | |
| 91 | S | A | -2.3943 |