| Chain sequence(s) |
A: CAVTHEKCSDDYDCCGSLCCVGICAKTIAPCK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:07)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.8205 | |
| 2 | A | A | 0.1855 | |
| 3 | V | A | 0.9112 | |
| 4 | T | A | -0.4330 | |
| 5 | H | A | -1.4378 | |
| 6 | E | A | -1.8651 | |
| 7 | K | A | -2.1052 | |
| 8 | C | A | -0.9824 | |
| 9 | S | A | -1.0699 | |
| 10 | D | A | -1.3015 | |
| 11 | D | A | -0.6971 | |
| 12 | Y | A | 0.2072 | |
| 13 | D | A | -0.2024 | |
| 14 | C | A | 0.0000 | |
| 15 | C | A | 0.6418 | |
| 16 | G | A | -0.3583 | |
| 17 | S | A | -0.9701 | |
| 18 | L | A | -0.5045 | |
| 19 | C | A | 0.0000 | |
| 20 | C | A | -0.1712 | |
| 21 | V | A | 0.9876 | |
| 22 | G | A | -0.1912 | |
| 23 | I | A | -0.6626 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | -0.5178 | |
| 26 | K | A | -1.0790 | |
| 27 | T | A | 0.4796 | |
| 28 | I | A | 1.6118 | |
| 29 | A | A | 0.4848 | |
| 30 | P | A | -0.5426 | |
| 31 | C | A | -0.5717 | |
| 32 | K | A | -1.5599 |