Project name: query_structure

Status: done

Started: 2026-03-16 23:11:54
Settings
Chain sequence(s) A: SWPICKRNGLPVCGETCTLGTCSTQGCTC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:09)
Show buried residues

Minimal score value
-2.3259
Maximal score value
1.6687
Average score
-0.1806
Total score value
-5.2363

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A 0.7853
2 W A 1.6687
3 P A 1.3296
4 I A 1.5983
5 C A 0.0000
6 K A -0.7664
7 R A -2.3259
8 N A -1.9000
9 G A -0.9594
10 L A 0.3954
11 P A 0.4010
12 V A 0.9120
13 C A -0.3314
14 G A -0.5689
15 E A -1.2507
16 T A 0.0109
17 C A 0.0000
18 T A 0.7932
19 L A 1.3936
20 G A 0.4741
21 T A 0.3313
22 C A 0.0000
23 S A -0.7244
24 T A -1.2465
25 Q A -1.6382
26 G A -1.6173
27 C A -1.6024
28 T A -0.7919
29 C A 0.3937
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Laboratory of Theory of Biopolymers 2018