| Chain sequence(s) |
A: SWPICKRNGLPVCGETCTLGTCSTQGCTC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | 0.7853 | |
| 2 | W | A | 1.6687 | |
| 3 | P | A | 1.3296 | |
| 4 | I | A | 1.5983 | |
| 5 | C | A | 0.0000 | |
| 6 | K | A | -0.7664 | |
| 7 | R | A | -2.3259 | |
| 8 | N | A | -1.9000 | |
| 9 | G | A | -0.9594 | |
| 10 | L | A | 0.3954 | |
| 11 | P | A | 0.4010 | |
| 12 | V | A | 0.9120 | |
| 13 | C | A | -0.3314 | |
| 14 | G | A | -0.5689 | |
| 15 | E | A | -1.2507 | |
| 16 | T | A | 0.0109 | |
| 17 | C | A | 0.0000 | |
| 18 | T | A | 0.7932 | |
| 19 | L | A | 1.3936 | |
| 20 | G | A | 0.4741 | |
| 21 | T | A | 0.3313 | |
| 22 | C | A | 0.0000 | |
| 23 | S | A | -0.7244 | |
| 24 | T | A | -1.2465 | |
| 25 | Q | A | -1.6382 | |
| 26 | G | A | -1.6173 | |
| 27 | C | A | -1.6024 | |
| 28 | T | A | -0.7919 | |
| 29 | C | A | 0.3937 |