Project name: query_structure

Status: done

Started: 2026-03-17 00:12:57
Settings
Chain sequence(s) A: AAPRVITLSPANTELAFAAGITPVGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGPDQIPKIKQYWGEQLKIPVIPLTSDWFERASPRIILAAQQLCNALSQVD
C: AAPRVITLSPANTELAFAAGITPVGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGPDQIPKIKQYWGEQLKIPVIPLTSDWFERASPRIILAAQQLCNALSQVD
B: AAPRVITLSPANTELAFAAGITPVGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGPDQIPKIKQYWGEQLKIPVIPLTSDWFERASPRIILAAQQLCNALSQVD
E: AAPRVITLSPANTELAFAAGITPVGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGPDQIPKIKQYWGEQLKIPVIPLTSDWFERASPRIILAAQQLCNALSQVD
D: AAPRVITLSPANTELAFAAGITPVGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGPDQIPKIKQYWGEQLKIPVIPLTSDWFERASPRIILAAQQLCNALSQVD
G: MQLVESGGGLVQPGGSLRLSCAAPESTLDDYAIGWFRQAPGKEREGVSCIGSSGDSTNYADSVKGRFTVSRDNAKNTVYLQMNDLRPEDTAVYYCAAAHRIFGGCLVIHSSGYVSWGQGTPVTVSS
F: AAPRVITLSPANTELAFAAGITPVGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGPDQIPKIKQYWGEQLKIPVIPLTSDWFERASPRIILAAQQLCNALSQVD
I: MQLVESGGGLVQPGGSLRLSCAAPESTLDDYAIGWFRQAPGKEREGVSCIGSSGDSTNYADSVKGRFTVSRDNAKNTVYLQMNDLRPEDTAVYYCAAAHRIFGGCLVIHSSGYVSWGQGTPVTVSS
H: MQLVESGGGLVQPGGSLRLSCAAPESTLDDYAIGWFRQAPGKEREGVSCIGSSGDSTNYADSVKGRFTVSRDNAKNTVYLQMNDLRPEDTAVYYCAAAHRIFGGCLVIHSSGYVSWGQGTPVTVSS
K: MQLVESGGGLVQPGGSLRLSCAAPESTLDDYAIGWFRQAPGKEREGVSCIGSSGDSTNYADSVKGRFTVSRDNAKNTVYLQMNDLRPEDTAVYYCAAAHRIFGGCLVIHSSGYVSWGQGTPVTVSS
J: MQLVESGGGLVQPGGSLRLSCAAPESTLDDYAIGWFRQAPGKEREGVSCIGSSGDSTNYADSVKGRFTVSRDNAKNTVYLQMNDLRPEDTAVYYCAAAHRIFGGCLVIHSSGYVSWGQGTPVTVSS
L: MQLVESGGGLVQPGGSLRLSCAAPESTLDDYAIGWFRQAPGKEREGVSCIGSSGDSTNYADSVKGRFTVSRDNAKNTVYLQMNDLRPEDTAVYYCAAAHRIFGGCLVIHSSGYVSWGQGTPVTVSS
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:03)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:35:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:36:12)
Show buried residues

Minimal score value
-4.0003
Maximal score value
1.2624
Average score
-0.755
Total score value
-1680.6161

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
22 A A -0.0618
23 A A -0.4645
24 P A -0.7928
25 R A -1.4630
26 V A 0.0000
27 I A 0.0000
28 T A 0.0000
29 L A 0.0000
30 S A 0.0000
31 P A -0.2169
32 A A -0.2518
33 N A 0.0000
34 T A 0.0000
35 E A 0.0000
36 L A 0.0000
37 A A 0.0000
38 F A 0.1985
39 A A -0.2158
40 A A 0.0000
41 G A -0.9032
42 I A 0.0000
43 T A -0.0885
44 P A 0.0000
45 V A -0.2946
46 G A 0.0000
47 V A 0.0000
48 S A 0.0000
49 S A 0.0000
50 Y A -0.3279
51 S A 0.0000
52 D A -1.5534
53 Y A -0.3020
54 P A -0.3239
55 P A -1.3102
56 Q A -1.6727
57 A A 0.0000
58 Q A -2.6132
59 K A -2.7915
60 I A -1.8112
61 E A -1.8869
62 Q A -1.9247
63 V A 0.0000
64 S A 0.0000
65 T A -0.7974
66 W A 0.0000
67 Q A -1.5335
68 G A -0.8989
69 M A -0.9574
70 N A -1.5198
71 L A -1.0682
72 E A -2.0358
73 R A -2.0112
74 I A 0.0000
75 V A -0.7436
76 A A -1.0359
77 L A -1.1763
78 K A -2.0034
79 P A -1.7044
80 D A -2.1596
81 L A 0.0000
82 V A 0.0000
83 I A 0.0000
84 A A 0.0000
85 W A -0.2866
86 R A -0.7161
87 G A -0.7313
88 G A 0.0000
89 N A -0.7104
90 A A -0.8661
91 E A -1.3957
92 R A -1.7158
93 Q A -1.1527
94 V A 0.0000
95 D A 0.0000
96 Q A -0.6921
97 L A 0.0000
98 A A 0.0000
99 S A -0.2215
100 L A 0.7507
101 G A -0.4106
102 I A 0.0000
103 K A -0.5700
104 V A 0.0000
105 M A 0.0000
106 W A -0.0582
107 V A 0.0000
108 D A -0.4847
109 A A 0.0000
110 T A -0.8474
111 S A 0.0000
112 I A 0.0000
113 E A 0.0000
114 Q A 0.0000
115 I A 0.0000
116 A A 0.0000
117 N A 0.0000
118 A A 0.0000
119 L A 0.0000
120 R A -1.1074
121 Q A -0.4577
122 L A 0.0000
123 A A 0.0000
124 P A -0.6800
125 W A -0.5825
126 S A 0.0000
127 P A -1.1273
128 Q A -2.2290
129 P A -2.2625
130 D A -3.1582
131 K A -2.5159
132 A A 0.0000
133 E A -2.5914
134 Q A -2.2785
135 A A -1.5560
136 A A 0.0000
137 Q A -1.6905
138 S A -1.3608
139 L A 0.0000
140 L A 0.0000
141 D A -2.0944
142 Q A -1.5689
143 Y A -1.1167
144 A A -1.4755
145 Q A -1.7820
146 L A 0.0000
147 K A -1.7947
148 A A -1.4765
149 Q A -1.6475
150 Y A 0.0000
151 A A -1.6226
152 D A -2.4832
153 K A -2.0168
154 P A -1.7113
155 K A -1.7770
156 K A 0.0000
157 R A -1.6342
158 V A 0.0000
159 F A 0.0000
160 L A 0.0000
161 Q A 0.0000
162 F A 0.0000
163 G A 0.0000
164 I A 0.0000
165 N A -0.8051
166 P A -0.8242
167 P A 0.0000
168 F A 0.0000
169 T A 0.0000
170 S A 0.0000
171 G A 0.0000
172 K A -2.8967
173 E A -2.9248
174 S A -1.3056
175 I A 0.0000
176 Q A 0.0000
177 N A 0.0000
178 Q A 0.0000
179 V A 0.0000
180 L A 0.0000
181 E A -1.0382
182 V A 0.0000
183 C A 0.0000
184 G A 0.0000
185 G A 0.0000
186 E A -1.6234
187 N A 0.0000
188 I A 0.0000
189 F A 0.0000
190 K A -2.4532
191 D A -2.9197
192 S A -2.1697
193 R A -2.4398
194 V A -0.9989
195 P A -1.3296
196 W A -0.4465
197 P A -0.6749
198 Q A -1.2417
199 V A 0.0000
200 S A -1.5289
201 R A -2.0069
202 E A -2.6236
203 Q A -1.9581
204 V A 0.0000
205 L A -1.0113
206 A A -1.0611
207 R A -1.1839
208 S A -0.6138
209 P A 0.0000
210 Q A -1.1566
211 A A 0.0000
212 I A 0.0000
213 V A 0.0000
214 I A 0.0000
215 T A 0.0000
216 G A -0.5680
217 G A -0.8280
218 P A -1.2466
219 D A -2.1387
220 Q A -1.7110
221 I A 0.0000
222 P A -1.8248
223 K A -1.9897
224 I A 0.0000
225 K A -2.6580
226 Q A -2.4250
227 Y A -1.7320
228 W A 0.0000
229 G A -2.5672
230 E A -3.1939
231 Q A -2.6073
232 L A -1.9385
233 K A -2.4335
234 I A -1.0163
235 P A -0.5701
236 V A -0.2709
237 I A 0.0000
238 P A 0.0000
239 L A 0.0000
240 T A -0.3352
241 S A -0.5629
242 D A -0.7901
243 W A 0.0000
244 F A 0.0000
245 E A -0.5774
246 R A -0.5618
247 A A -0.3511
248 S A 0.0000
249 P A -0.0993
250 R A -0.2118
251 I A 0.0000
252 I A 0.1305
253 L A 0.0773
254 A A 0.0000
255 A A 0.0000
256 Q A -0.1402
257 Q A 0.0000
258 L A 0.0000
259 C A 0.0000
260 N A 0.0000
261 A A -0.1145
262 L A 0.0000
263 S A -0.5932
264 Q A -0.8152
265 V A 0.0000
266 D A -1.9930
22 A B -0.0662
23 A B -0.4554
24 P B -0.7614
25 R B -1.4514
26 V B 0.0000
27 I B 0.0000
28 T B 0.0000
29 L B 0.0000
30 S B 0.0000
31 P B -0.1838
32 A B -0.2381
33 N B 0.0000
34 T B 0.0000
35 E B 0.0000
36 L B 0.0000
37 A B 0.0000
38 F B 0.0374
39 A B -0.4132
40 A B 0.0000
41 G B -1.1091
42 I B 0.0000
43 T B -0.1531
44 P B 0.0000
45 V B -0.2964
46 G B 0.0000
47 V B 0.0000
48 S B 0.0000
49 S B -0.6201
50 Y B -0.2372
51 S B 0.0000
52 D B -1.6767
53 Y B -0.4412
54 P B -0.4960
55 P B -1.3691
56 Q B -1.7377
57 A B 0.0000
58 Q B -2.7822
59 K B -2.9330
60 I B -1.8997
61 E B -1.9206
62 Q B -2.0099
63 V B 0.0000
64 S B 0.0000
65 T B -0.7472
66 W B 0.0000
67 Q B -1.3008
68 G B -0.8375
69 M B -1.0298
70 N B -1.6588
71 L B -1.2042
72 E B -2.0546
73 R B -2.0167
74 I B 0.0000
75 V B -0.6622
76 A B -0.9911
77 L B -1.0908
78 K B -1.9257
79 P B -1.5652
80 D B -2.0021
81 L B 0.0000
82 V B 0.0000
83 I B 0.0000
84 A B 0.0000
85 W B -0.2560
86 R B -0.6819
87 G B -0.7513
88 G B 0.0000
89 N B 0.0000
90 A B -0.7193
91 E B -1.0470
92 R B -1.2536
93 Q B -1.1614
94 V B 0.0000
95 D B 0.0000
96 Q B -0.6146
97 L B 0.0000
98 A B 0.0000
99 S B -0.1739
100 L B 1.0184
101 G B -0.3504
102 I B 0.0000
103 K B -0.5276
104 V B 0.0000
105 M B 0.0000
106 W B -0.0575
107 V B 0.0000
108 D B -0.4808
109 A B 0.0000
110 T B -0.7498
111 S B 0.0000
112 I B 0.0000
113 E B -0.3355
114 Q B 0.0000
115 I B 0.0000
116 A B 0.0000
117 N B 0.0000
118 A B 0.0000
119 L B 0.0000
120 R B -1.2999
121 Q B -0.4685
122 L B 0.0000
123 A B 0.0000
124 P B -0.6827
125 W B -0.5667
126 S B 0.0000
127 P B -1.2076
128 Q B -2.4666
129 P B -2.5919
130 D B -3.6116
131 K B -3.2841
132 A B 0.0000
133 E B -3.1618
134 Q B -2.8901
135 A B -1.9612
136 A B 0.0000
137 Q B -2.1370
138 S B -1.6570
139 L B 0.0000
140 L B 0.0000
141 D B -2.6405
142 Q B -2.1172
143 Y B -1.5480
144 A B -1.7843
145 Q B -2.3455
146 L B 0.0000
147 K B -2.0446
148 A B -1.6339
149 Q B -2.0953
150 Y B -1.9457
151 A B -1.8302
152 D B -2.6180
153 K B -2.1370
154 P B -1.8254
155 K B -2.2518
156 K B 0.0000
157 R B -1.8285
158 V B 0.0000
159 F B 0.0000
160 L B 0.0000
161 Q B 0.0000
162 F B 0.0000
163 G B 0.0000
164 I B 0.0000
165 N B -0.7281
166 P B -0.7310
167 P B 0.0000
168 F B 0.0000
169 T B 0.0000
170 S B 0.0000
171 G B 0.0000
172 K B -2.7714
173 E B -2.4361
174 S B -1.0935
175 I B 0.0000
176 Q B 0.0000
177 N B 0.0000
178 Q B -0.9570
179 V B 0.0000
180 L B 0.0000
181 E B -1.3694
182 V B 0.0000
183 C B 0.0000
184 G B 0.0000
185 G B 0.0000
186 E B -2.0169
187 N B 0.0000
188 I B 0.0000
189 F B 0.0000
190 K B -2.5883
191 D B -2.9005
192 S B -2.0600
193 R B -2.2405
194 V B -0.5216
195 P B -1.0397
196 W B -0.2493
197 P B -0.5736
198 Q B -1.2057
199 V B 0.0000
200 S B -1.3683
201 R B -1.5659
202 E B -2.3013
203 Q B -1.8493
204 V B 0.0000
205 L B -0.6650
206 A B -0.9239
207 R B -1.1416
208 S B -0.5668
209 P B 0.0000
210 Q B -1.2556
211 A B 0.0000
212 I B 0.0000
213 V B 0.0000
214 I B 0.0000
215 T B 0.0000
216 G B -0.5949
217 G B -0.9016
218 P B -1.2778
219 D B -2.1578
220 Q B -1.6265
221 I B -1.1582
222 P B -1.6504
223 K B -1.7889
224 I B 0.0000
225 K B -2.2767
226 Q B -2.2618
227 Y B -1.4890
228 W B 0.0000
229 G B -2.3507
230 E B -2.8828
231 Q B -2.1129
232 L B -1.7904
233 K B -2.0727
234 I B -0.9051
235 P B -0.6400
236 V B -0.0941
237 I B 0.0000
238 P B -0.1581
239 L B 0.0000
240 T B -0.2647
241 S B -0.4895
242 D B -0.7036
243 W B -0.1358
244 F B 0.0000
245 E B -0.4861
246 R B -0.4810
247 A B -0.3282
248 S B 0.0000
249 P B -0.0354
250 R B -0.0245
251 I B 0.0000
252 I B 0.0000
253 L B 0.1421
254 A B 0.0000
255 A B 0.0000
256 Q B -1.1790
257 Q B -0.9889
258 L B 0.0000
259 C B 0.0000
260 N B -1.8443
261 A B -1.1874
262 L B 0.0000
263 S B -1.4209
264 Q B -1.9099
265 V B 0.0000
266 D B -2.3018
22 A C -0.0680
23 A C -0.4460
24 P C -0.7682
25 R C -1.2562
26 V C 0.0000
27 I C 0.0000
28 T C 0.0000
29 L C 0.0000
30 S C 0.0000
31 P C -0.2559
32 A C -0.2683
33 N C 0.0000
34 T C 0.0000
35 E C 0.0000
36 L C 0.0000
37 A C 0.0000
38 F C 0.0336
39 A C -0.4260
40 A C 0.0000
41 G C -1.0411
42 I C 0.0000
43 T C -0.2391
44 P C 0.0000
45 V C -0.2502
46 G C 0.0000
47 V C 0.0000
48 S C 0.0000
49 S C 0.0000
50 Y C -0.3244
51 S C 0.0000
52 D C -2.0542
53 Y C -0.6199
54 P C -0.6507
55 P C -1.6568
56 Q C -2.1843
57 A C 0.0000
58 Q C -3.0389
59 K C -3.1721
60 I C 0.0000
61 E C -1.9524
62 Q C -1.9166
63 V C 0.0000
64 S C 0.0000
65 T C -0.7830
66 W C 0.0000
67 Q C -1.5429
68 G C -1.0011
69 M C -1.0257
70 N C -1.6205
71 L C -1.4373
72 E C -2.0259
73 R C -1.7935
74 I C 0.0000
75 V C 0.0000
76 A C -1.0875
77 L C -0.8392
78 K C -1.4697
79 P C -1.2936
80 D C -1.8458
81 L C 0.0000
82 V C 0.0000
83 I C 0.0000
84 A C 0.0000
85 W C -0.3060
86 R C -0.7525
87 G C -0.8101
88 G C 0.0000
89 N C -0.7413
90 A C -0.9168
91 E C -1.3656
92 R C -1.6007
93 Q C -1.4018
94 V C 0.0000
95 D C 0.0000
96 Q C -0.8036
97 L C 0.0000
98 A C 0.0000
99 S C -0.4897
100 L C -0.1619
101 G C -0.7242
102 I C -0.6085
103 K C -0.5903
104 V C 0.0000
105 M C 0.0000
106 W C -0.1059
107 V C 0.0000
108 D C -0.4873
109 A C 0.0000
110 T C -0.9599
111 S C 0.0000
112 I C 0.0000
113 E C 0.0000
114 Q C 0.0000
115 I C 0.0000
116 A C 0.0000
117 N C 0.0000
118 A C 0.0000
119 L C 0.0000
120 R C 0.0000
121 Q C -0.4036
122 L C 0.0000
123 A C -1.4031
124 P C -0.6104
125 W C -0.5047
126 S C 0.0000
127 P C -1.1318
128 Q C -2.2422
129 P C -2.4875
130 D C -3.5850
131 K C -3.1787
132 A C 0.0000
133 E C -3.4719
134 Q C -3.0180
135 A C -2.0229
136 A C 0.0000
137 Q C -2.0661
138 S C -1.7145
139 L C 0.0000
140 L C 0.0000
141 D C -2.6743
142 Q C -2.1647
143 Y C -1.5595
144 A C -1.8112
145 Q C -2.4582
146 L C 0.0000
147 K C -2.0041
148 A C -1.6083
149 Q C -2.0595
150 Y C -1.8191
151 A C -1.6743
152 D C -2.4910
153 K C -1.9211
154 P C -1.6159
155 K C -1.8551
156 K C -1.6474
157 R C -1.7095
158 V C 0.0000
159 F C 0.0000
160 L C 0.0000
161 Q C 0.0000
162 F C 0.0000
163 G C 0.0000
164 I C 0.0000
165 N C -0.9283
166 P C -0.8743
167 P C 0.0000
168 F C 0.0000
169 T C 0.0000
170 S C 0.0000
171 G C 0.0000
172 K C -3.6295
173 E C -3.2359
174 S C -1.4985
175 I C 0.0000
176 Q C 0.0000
177 N C 0.0000
178 Q C -0.9868
179 V C 0.0000
180 L C 0.0000
181 E C -1.1596
182 V C 0.0000
183 C C 0.0000
184 G C 0.0000
185 G C 0.0000
186 E C -1.7890
187 N C 0.0000
188 I C 0.0000
189 F C 0.0000
190 K C -2.8814
191 D C -3.1228
192 S C -2.2337
193 R C -2.5038
194 V C -0.5519
195 P C -1.2546
196 W C -0.3608
197 P C -0.5692
198 Q C -1.1804
199 V C 0.0000
200 S C -1.4032
201 R C -1.6086
202 E C -2.3293
203 Q C -1.8680
204 V C 0.0000
205 L C -0.5665
206 A C -0.9164
207 R C -1.1491
208 S C -0.5537
209 P C 0.0000
210 Q C -1.1999
211 A C 0.0000
212 I C 0.0000
213 V C 0.0000
214 I C 0.0000
215 T C 0.0000
216 G C -0.6263
217 G C -0.8873
218 P C -1.3061
219 D C -2.1682
220 Q C -1.6262
221 I C -1.2566
222 P C -1.6870
223 K C -1.8703
224 I C 0.0000
225 K C -2.1194
226 Q C -2.2148
227 Y C -1.4761
228 W C 0.0000
229 G C -2.1496
230 E C -2.6862
231 Q C -1.7791
232 L C -1.4592
233 K C -1.8336
234 I C -0.6144
235 P C -0.5146
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48 E J -2.1047
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82 Y K -1.0701
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100 T K -0.6291
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102 Y K -0.5702
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104 Q K -1.4947
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106 N K -2.9490
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132 H L -1.0502
133 S L -0.7981
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136 Y L 1.2559
137 V L 0.7325
138 S L 0.3566
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141 Q L -1.0136
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147 V L 0.0000
148 S L -0.6746
149 S L -0.5355
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Laboratory of Theory of Biopolymers 2018