Project name: CM335-343(2)

Status: done

Started: 2026-05-12 05:34:27
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Chain sequence(s) A: HYTVNS
C: HYTVNS
B: HYTVNS
E: HYTVNS
D: HYTVNS
G: HYTVNS
F: HYTVNS
I: HYTVNS
H: HYTVNS
J: HYTVNS
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,J
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:14)
Show buried residues

Minimal score value
-1.4967
Maximal score value
1.4583
Average score
-0.3736
Total score value
-22.4161

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 H E -1.3894
2 Y E -0.6220
3 T E -0.7338
4 V E 0.0000
5 N E -1.2814
6 S E -0.9419
1 H C -1.4437
2 Y C -0.8516
3 T C -0.7449
4 V C 0.0000
5 N C -0.8277
6 S C -0.6244
1 H A -0.9549
2 Y A 0.0229
3 T A -0.0477
4 V A 0.1728
5 N A -1.1898
6 S A -0.8958
1 H B -0.5527
2 Y B 0.8607
3 T B 0.4286
4 V B 0.3841
5 N B -0.3528
6 S B -0.5135
1 H D -1.0575
2 Y D -0.1289
3 T D 0.0000
4 V D 0.0000
5 N D -0.0201
6 S D -0.1438
1 H I -1.0617
2 Y I -0.3063
3 T I -0.4573
4 V I -0.4623
5 N I -1.4967
6 S I -1.0069
1 H G -1.4409
2 Y G -0.9474
3 T G -0.9614
4 V G 0.0000
5 N G -1.0301
6 S G -0.8424
1 H F -1.0525
2 Y F 0.2295
3 T F 0.0000
4 V F 0.0000
5 N F 0.0000
6 S F -0.4306
1 H H -1.0267
2 Y H 0.1146
3 T H 0.1797
4 V H 0.0000
5 N H 0.2175
6 S H 0.0284
1 H J -0.5477
2 Y J 1.0947
3 T J 0.9162
4 V J 1.4583
5 N J 0.1147
6 S J -0.2496
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Laboratory of Theory of Biopolymers 2018