| Chain sequence(s) |
B: AAFKDEMMKSLAALEKVLEKLEELLSPEQAKEARAKFAKIKAKVEKIMET
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:11)
[INFO] Main: Simulation completed successfully. (00:02:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | -0.0469 | |
| 2 | A | B | 0.0124 | |
| 3 | F | B | 0.5682 | |
| 4 | K | B | -1.1161 | |
| 5 | D | B | -1.8207 | |
| 6 | E | B | -2.2413 | |
| 7 | M | B | -1.1640 | |
| 8 | M | B | -1.3448 | |
| 9 | K | B | -2.1641 | |
| 10 | S | B | -1.3402 | |
| 11 | L | B | -0.6517 | |
| 12 | A | B | -0.7732 | |
| 13 | A | B | -0.4700 | |
| 14 | L | B | 0.0193 | |
| 15 | E | B | -1.6013 | |
| 16 | K | B | -2.0542 | |
| 17 | V | B | -0.5086 | |
| 18 | L | B | 0.0000 | |
| 19 | E | B | -3.2331 | |
| 20 | K | B | -2.4523 | |
| 21 | L | B | -1.0334 | |
| 22 | E | B | -2.9402 | |
| 23 | E | B | -2.0053 | |
| 24 | L | B | 0.1677 | |
| 25 | L | B | -0.6521 | |
| 26 | S | B | -1.4201 | |
| 27 | P | B | -2.3642 | |
| 28 | E | B | -3.7841 | |
| 29 | Q | B | -3.3009 | |
| 30 | A | B | 0.0000 | |
| 31 | K | B | -4.5600 | |
| 32 | E | B | -4.6036 | |
| 33 | A | B | -3.6995 | |
| 34 | R | B | -4.3752 | |
| 35 | A | B | -3.1360 | |
| 36 | K | B | -3.1493 | |
| 37 | F | B | 0.0000 | |
| 38 | A | B | -2.1019 | |
| 39 | K | B | -2.6447 | |
| 40 | I | B | -1.4392 | |
| 41 | K | B | -1.9021 | |
| 42 | A | B | -2.2363 | |
| 43 | K | B | -2.7510 | |
| 44 | V | B | 0.0000 | |
| 45 | E | B | -3.1550 | |
| 46 | K | B | -2.9940 | |
| 47 | I | B | -1.1173 | |
| 48 | M | B | -1.5073 | |
| 49 | E | B | -2.6254 | |
| 50 | T | B | -1.0977 |