Project name: query_structure

Status: done

Started: 2026-03-16 23:07:25
Settings
Chain sequence(s) A: EIPCGESCVYLPCFLPNCYCRNHVCYLNG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:09)
Show buried residues

Minimal score value
-1.9153
Maximal score value
2.633
Average score
0.2802
Total score value
8.1246

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -1.1625
2 I A 0.9453
3 P A 0.2758
4 C A 0.4724
5 G A -0.0727
6 E A 0.3940
7 S A 0.4728
8 C A 1.2047
9 V A 1.6540
10 Y A 2.4315
11 L A 2.6330
12 P A 1.8240
13 C A 1.8890
14 F A 2.4109
15 L A 1.5133
16 P A 0.0813
17 N A -1.0878
18 C A -0.0006
19 Y A 0.0476
20 C A 0.0554
21 R A -1.8016
22 N A -1.9153
23 H A -0.8192
24 V A -0.4303
25 C A 0.0000
26 Y A -0.1728
27 L A -0.0688
28 N A -1.5081
29 G A -1.1407
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Laboratory of Theory of Biopolymers 2018