| Chain sequence(s) |
A: PQCVKKDELCIPYYLDCCEPLECKKVNWWDHKCIG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | A | -0.6830 | |
| 2 | Q | A | -0.9250 | |
| 3 | C | A | -0.1762 | |
| 4 | V | A | -1.1462 | |
| 5 | K | A | -2.6411 | |
| 6 | K | A | -3.2615 | |
| 7 | D | A | -2.8621 | |
| 8 | E | A | -1.8730 | |
| 9 | L | A | -0.5815 | |
| 10 | C | A | 0.0000 | |
| 11 | I | A | 0.4013 | |
| 12 | P | A | 0.4329 | |
| 13 | Y | A | 1.9980 | |
| 14 | Y | A | 2.0836 | |
| 15 | L | A | 1.3576 | |
| 16 | D | A | -1.1678 | |
| 17 | C | A | 0.0000 | |
| 18 | C | A | -1.6997 | |
| 19 | E | A | -2.5472 | |
| 20 | P | A | -1.7326 | |
| 21 | L | A | -2.0900 | |
| 22 | E | A | -2.1149 | |
| 23 | C | A | -1.7965 | |
| 24 | K | A | -2.2778 | |
| 25 | K | A | -1.4547 | |
| 26 | V | A | 0.1494 | |
| 27 | N | A | -0.2100 | |
| 28 | W | A | 1.1522 | |
| 29 | W | A | 1.2385 | |
| 30 | D | A | -0.0712 | |
| 31 | H | A | -0.9195 | |
| 32 | K | A | -1.8136 | |
| 33 | C | A | 0.0000 | |
| 34 | I | A | -0.3318 | |
| 35 | G | A | -0.9084 |