| Chain sequence(s) |
A: KKDDWSSFY
C: KKKDDWSSFY B: KDDWSSFY D: KDDDWSSSFY input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:24)
[INFO] Main: Simulation completed successfully. (00:00:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.3314 | |
| 2 | D | A | -1.0352 | |
| 3 | W | A | 1.4989 | |
| 4 | S | A | 1.0625 | |
| 5 | F | A | 0.7540 | |
| 6 | Y | A | -0.7415 | |
| 1 | K | B | -2.6943 | |
| 2 | D | B | -2.1802 | |
| 3 | W | B | 0.9349 | |
| 4 | S | B | 1.3655 | |
| 5 | F | B | 2.3826 | |
| 6 | Y | B | 1.2586 | |
| 1 | K | C | -2.2962 | |
| 2 | D | C | -1.7616 | |
| 3 | W | C | 0.8414 | |
| 4 | S | C | 0.9417 | |
| 5 | F | C | 1.5422 | |
| 6 | Y | C | 0.9340 | |
| 1 | K | D | -1.5571 | |
| 2 | D | D | -1.2881 | |
| 3 | W | D | 1.0816 | |
| 4 | S | D | 0.9135 | |
| 5 | F | D | 1.2237 | |
| 6 | Y | D | 0.7756 |