Project name: renyuan

Status: done

Started: 2026-07-26 13:03:16
Settings
Chain sequence(s) A: CGNLSTCMLGTYTQDFNKFHTFPQTAIGVGAP
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:20)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:21)
Show buried residues

Minimal score value
-1.2562
Maximal score value
1.9871
Average score
0.5496
Total score value
17.5864

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.6851
2 G A -0.4016
3 N A -0.3139
4 L A 1.3237
5 S A 0.8553
6 T A 0.8861
7 C A 1.3422
8 M A 1.8484
9 L A 1.9871
10 G A 0.9877
11 T A 0.5803
12 Y A 1.0673
13 T A 0.2586
14 Q A -1.2562
15 D A -0.5215
16 F A 0.6182
17 N A -1.0719
18 K A -0.9444
19 F A 1.1052
20 H A -0.4014
21 T A -0.2252
22 F A 1.5690
23 P A 0.5394
24 Q A 0.0234
25 T A 0.6509
26 A A 1.1157
27 I A 1.9227
28 G A 0.9305
29 V A 1.5493
30 G A 0.5802
31 A A 0.4314
32 P A -0.1352
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Laboratory of Theory of Biopolymers 2018