| Chain sequence(s) |
A: FYGHKYF
C: FYGHKYF B: FYGHKYF E: FYGHKYF D: FYGHKYF G: FYGHKYF F: FYGHKYF I: FYGHKYF H: FYGHKYF K: FYGHKYF J: FYGHKYF M: FYGHKYF L: FYGHKYF O: FYGHKYF N: FYGHKYF Q: FYGHKYF P: FYGHKYF S: FYGHKYF R: FYGHKYF T: FYGHKYF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:35)
[INFO] Main: Simulation completed successfully. (00:06:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 3.3189 | |
| 2 | Y | A | 2.5008 | |
| 3 | G | A | 0.0000 | |
| 4 | H | A | 3.3457 | |
| 5 | K | A | 2.8972 | |
| 6 | Y | A | 3.2966 | |
| 7 | F | A | 2.8861 | |
| 1 | F | B | 3.3792 | |
| 2 | Y | B | 2.5455 | |
| 3 | G | B | 0.0000 | |
| 4 | H | B | 1.3496 | |
| 5 | K | B | 2.0477 | |
| 6 | Y | B | 2.8787 | |
| 7 | F | B | 3.5429 | |
| 1 | F | C | 3.9989 | |
| 2 | Y | C | 3.0631 | |
| 3 | G | C | 0.0000 | |
| 4 | H | C | 1.4969 | |
| 5 | K | C | 1.9837 | |
| 6 | Y | C | 2.7899 | |
| 7 | F | C | 3.4138 | |
| 1 | F | D | 3.7354 | |
| 2 | Y | D | 3.8287 | |
| 3 | G | D | 0.0000 | |
| 4 | H | D | 1.9993 | |
| 5 | K | D | 2.0161 | |
| 6 | Y | D | 2.4405 | |
| 7 | F | D | 3.4701 | |
| 1 | F | E | 2.9555 | |
| 2 | Y | E | 2.4402 | |
| 3 | G | E | 1.6249 | |
| 4 | H | E | 0.4199 | |
| 5 | K | E | 1.1778 | |
| 6 | Y | E | 1.6563 | |
| 7 | F | E | 2.8686 | |
| 1 | F | F | 2.2913 | |
| 2 | Y | F | 1.7553 | |
| 3 | G | F | 0.2469 | |
| 4 | H | F | 0.0171 | |
| 5 | K | F | -0.5432 | |
| 6 | Y | F | 1.7550 | |
| 7 | F | F | 2.9333 | |
| 1 | F | G | 0.0000 | |
| 2 | Y | G | 1.3664 | |
| 3 | G | G | -1.2986 | |
| 4 | H | G | 0.0989 | |
| 5 | K | G | -0.6502 | |
| 6 | Y | G | 1.7127 | |
| 7 | F | G | 2.7745 | |
| 1 | F | H | 0.8783 | |
| 2 | Y | H | 1.1498 | |
| 3 | G | H | 0.0000 | |
| 4 | H | H | -0.3552 | |
| 5 | K | H | -1.3149 | |
| 6 | Y | H | 0.0000 | |
| 7 | F | H | 2.3417 | |
| 1 | F | I | 2.7996 | |
| 2 | Y | I | 1.8551 | |
| 3 | G | I | 0.6822 | |
| 4 | H | I | -0.2307 | |
| 5 | K | I | -0.6690 | |
| 6 | Y | I | 1.3228 | |
| 7 | F | I | 2.1853 | |
| 1 | F | J | 1.9611 | |
| 2 | Y | J | 1.8380 | |
| 3 | G | J | 1.3115 | |
| 4 | H | J | 1.1494 | |
| 5 | K | J | 0.3617 | |
| 6 | Y | J | 2.0238 | |
| 7 | F | J | 2.2367 | |
| 1 | F | K | 2.6159 | |
| 2 | Y | K | 2.8982 | |
| 3 | G | K | 0.0000 | |
| 4 | H | K | 1.6960 | |
| 5 | K | K | 0.5401 | |
| 6 | Y | K | 1.8973 | |
| 7 | F | K | 2.0248 | |
| 1 | F | L | 2.9775 | |
| 2 | Y | L | 3.5484 | |
| 3 | G | L | 0.0000 | |
| 4 | H | L | 2.7124 | |
| 5 | K | L | 1.4859 | |
| 6 | Y | L | 2.2612 | |
| 7 | F | L | 2.2970 | |
| 1 | F | M | 2.8147 | |
| 2 | Y | M | 1.8759 | |
| 3 | G | M | 0.4657 | |
| 4 | H | M | 0.4034 | |
| 5 | K | M | -0.4302 | |
| 6 | Y | M | 1.3691 | |
| 7 | F | M | 2.0425 | |
| 1 | F | N | 3.0381 | |
| 2 | Y | N | 1.5462 | |
| 3 | G | N | 0.2337 | |
| 4 | H | N | 0.3249 | |
| 5 | K | N | -0.3060 | |
| 6 | Y | N | 1.9336 | |
| 7 | F | N | 2.8326 | |
| 1 | F | O | 3.3606 | |
| 2 | Y | O | 2.6882 | |
| 3 | G | O | 1.2364 | |
| 4 | H | O | 0.0461 | |
| 5 | K | O | -0.3965 | |
| 6 | Y | O | 1.5779 | |
| 7 | F | O | 2.1233 | |
| 1 | F | P | 2.8751 | |
| 2 | Y | P | 2.0489 | |
| 3 | G | P | 0.5112 | |
| 4 | H | P | 0.1090 | |
| 5 | K | P | 1.2677 | |
| 6 | Y | P | 2.5356 | |
| 7 | F | P | 2.3846 | |
| 1 | F | Q | 2.7479 | |
| 2 | Y | Q | 2.7994 | |
| 3 | G | Q | 1.8641 | |
| 4 | H | Q | 1.3152 | |
| 5 | K | Q | 2.5013 | |
| 6 | Y | Q | 2.6728 | |
| 7 | F | Q | 2.8556 | |
| 1 | F | R | 2.5012 | |
| 2 | Y | R | 1.6692 | |
| 3 | G | R | 1.0040 | |
| 4 | H | R | 0.1331 | |
| 5 | K | R | -0.3520 | |
| 6 | Y | R | 1.3246 | |
| 7 | F | R | 2.4344 | |
| 1 | F | S | 1.8528 | |
| 2 | Y | S | 1.6461 | |
| 3 | G | S | 0.1090 | |
| 4 | H | S | -0.2155 | |
| 5 | K | S | -0.1403 | |
| 6 | Y | S | 1.4359 | |
| 7 | F | S | 2.5530 | |
| 1 | F | T | 2.9577 | |
| 2 | Y | T | 1.5525 | |
| 3 | G | T | 0.2305 | |
| 4 | H | T | 0.2820 | |
| 5 | K | T | -0.2641 | |
| 6 | Y | T | 1.5916 | |
| 7 | F | T | 2.2598 |