Project name: FYGHKYF20

Status: done

Started: 2026-04-14 10:08:24
Settings
Chain sequence(s) A: FYGHKYF
C: FYGHKYF
B: FYGHKYF
E: FYGHKYF
D: FYGHKYF
G: FYGHKYF
F: FYGHKYF
I: FYGHKYF
H: FYGHKYF
K: FYGHKYF
J: FYGHKYF
M: FYGHKYF
L: FYGHKYF
O: FYGHKYF
N: FYGHKYF
Q: FYGHKYF
P: FYGHKYF
S: FYGHKYF
R: FYGHKYF
T: FYGHKYF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:06:35)
[INFO]       Main:     Simulation completed successfully.                                          (00:06:40)
Show buried residues

Minimal score value
-1.3149
Maximal score value
3.9989
Average score
1.601
Total score value
224.1439

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 3.3189
2 Y A 2.5008
3 G A 0.0000
4 H A 3.3457
5 K A 2.8972
6 Y A 3.2966
7 F A 2.8861
1 F B 3.3792
2 Y B 2.5455
3 G B 0.0000
4 H B 1.3496
5 K B 2.0477
6 Y B 2.8787
7 F B 3.5429
1 F C 3.9989
2 Y C 3.0631
3 G C 0.0000
4 H C 1.4969
5 K C 1.9837
6 Y C 2.7899
7 F C 3.4138
1 F D 3.7354
2 Y D 3.8287
3 G D 0.0000
4 H D 1.9993
5 K D 2.0161
6 Y D 2.4405
7 F D 3.4701
1 F E 2.9555
2 Y E 2.4402
3 G E 1.6249
4 H E 0.4199
5 K E 1.1778
6 Y E 1.6563
7 F E 2.8686
1 F F 2.2913
2 Y F 1.7553
3 G F 0.2469
4 H F 0.0171
5 K F -0.5432
6 Y F 1.7550
7 F F 2.9333
1 F G 0.0000
2 Y G 1.3664
3 G G -1.2986
4 H G 0.0989
5 K G -0.6502
6 Y G 1.7127
7 F G 2.7745
1 F H 0.8783
2 Y H 1.1498
3 G H 0.0000
4 H H -0.3552
5 K H -1.3149
6 Y H 0.0000
7 F H 2.3417
1 F I 2.7996
2 Y I 1.8551
3 G I 0.6822
4 H I -0.2307
5 K I -0.6690
6 Y I 1.3228
7 F I 2.1853
1 F J 1.9611
2 Y J 1.8380
3 G J 1.3115
4 H J 1.1494
5 K J 0.3617
6 Y J 2.0238
7 F J 2.2367
1 F K 2.6159
2 Y K 2.8982
3 G K 0.0000
4 H K 1.6960
5 K K 0.5401
6 Y K 1.8973
7 F K 2.0248
1 F L 2.9775
2 Y L 3.5484
3 G L 0.0000
4 H L 2.7124
5 K L 1.4859
6 Y L 2.2612
7 F L 2.2970
1 F M 2.8147
2 Y M 1.8759
3 G M 0.4657
4 H M 0.4034
5 K M -0.4302
6 Y M 1.3691
7 F M 2.0425
1 F N 3.0381
2 Y N 1.5462
3 G N 0.2337
4 H N 0.3249
5 K N -0.3060
6 Y N 1.9336
7 F N 2.8326
1 F O 3.3606
2 Y O 2.6882
3 G O 1.2364
4 H O 0.0461
5 K O -0.3965
6 Y O 1.5779
7 F O 2.1233
1 F P 2.8751
2 Y P 2.0489
3 G P 0.5112
4 H P 0.1090
5 K P 1.2677
6 Y P 2.5356
7 F P 2.3846
1 F Q 2.7479
2 Y Q 2.7994
3 G Q 1.8641
4 H Q 1.3152
5 K Q 2.5013
6 Y Q 2.6728
7 F Q 2.8556
1 F R 2.5012
2 Y R 1.6692
3 G R 1.0040
4 H R 0.1331
5 K R -0.3520
6 Y R 1.3246
7 F R 2.4344
1 F S 1.8528
2 Y S 1.6461
3 G S 0.1090
4 H S -0.2155
5 K S -0.1403
6 Y S 1.4359
7 F S 2.5530
1 F T 2.9577
2 Y T 1.5525
3 G T 0.2305
4 H T 0.2820
5 K T -0.2641
6 Y T 1.5916
7 F T 2.2598
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Laboratory of Theory of Biopolymers 2018