Project name: ee9fb72d6c9effb

Status: done

Started: 2026-06-27 15:35:01
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Chain sequence(s) A: GNNQQNY
C: GNNQQNY
B: GNNQQNY
E: GNNQQNY
D: GNNQQNY
G: GNNQQNY
F: GNNQQNY
I: GNNQQNY
H: GNNQQNY
K: GNNQQNY
J: GNNQQNY
L: GNNQQNY
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:38)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:40)
Show buried residues

Minimal score value
-2.5234
Maximal score value
2.1659
Average score
-0.566
Total score value
-47.5419

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.4106
2 N A -1.5940
3 N A -1.5793
4 Q A 0.0000
5 Q A -0.1686
6 N A 0.0000
7 Y A 1.6762
1 G B -1.4842
2 N B -2.0073
3 N B -2.2242
4 Q B 0.0000
5 Q B -0.8134
6 N B 0.0000
7 Y B 1.4372
1 G C -1.7546
2 N C -2.4829
3 N C -2.5234
4 Q C -1.8505
5 Q C -0.9170
6 N C -0.0781
7 Y C 1.4789
1 G D -1.5535
2 N D -1.8974
3 N D -1.7871
4 Q D 0.0000
5 Q D -0.2633
6 N D 0.0000
7 Y D 1.7747
1 G E -1.2697
2 N E -1.3179
3 N E -1.1176
4 Q E 0.0000
5 Q E 0.1052
6 N E 0.0000
7 Y E 2.0773
1 G F -1.2576
2 N F -1.2333
3 N F -1.0442
4 Q F 0.0000
5 Q F 0.1525
6 N F 0.0000
7 Y F 2.1659
1 G G -1.3662
2 N G -1.5311
3 N G -1.3014
4 Q G 0.0000
5 Q G -0.2023
6 N G 0.0000
7 Y G 1.8687
1 G H -1.2260
2 N H -1.8147
3 N H -1.6517
4 Q H -1.4986
5 Q H -0.9514
6 N H -0.5397
7 Y H 1.3394
1 G I -1.4928
2 N I -2.4293
3 N I -2.0223
4 Q I -1.8525
5 Q I -1.1583
6 N I -0.9329
7 Y I 1.0567
1 G J -1.6742
2 N J -1.8114
3 N J -1.5787
4 Q J 0.0000
5 Q J -0.5120
6 N J 0.0000
7 Y J 1.7374
1 G K -1.3051
2 N K -1.2861
3 N K -1.0388
4 Q K 0.0000
5 Q K 0.1019
6 N K 0.0000
7 Y K 1.7949
1 G L -1.1719
2 N L -1.2399
3 N L -1.1077
4 Q L 0.0000
5 Q L 0.0510
6 N L 0.0000
7 Y L 1.9669
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Laboratory of Theory of Biopolymers 2018