Project name: 1D6B2

Status: done

Started: 2026-07-22 07:36:39
Settings
Chain sequence(s) H: QVQLQQSGPELVKPGALVKISCKTSGFTFTSYDINWVKQRPGQGLEWIGWIYPGDGSTKYNEKFKDKATLTADKSSSTAYMQLSSLTSDNSAVYFCARQHYGYGDGAFVYWGQGTLVTVST
L: DIVMSQSPSSLAVSVGEKVTMSCKSSQSLLHSSNQNNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYYSYPRTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:12)
Show buried residues

Minimal score value
-3.8094
Maximal score value
1.0747
Average score
-0.5866
Total score value
-137.2695

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.5195
2 V H -0.9847
3 Q H -2.0644
4 L H 0.0000
5 Q H -2.2911
6 Q H 0.0000
7 S H -0.9569
8 G H -0.6255
9 P H 0.1431
11 E H 0.0639
12 L H 1.0747
13 V H 0.0837
14 K H -1.4009
15 P H -1.0368
16 G H -0.7293
17 A H -0.1279
18 L H 0.6299
19 V H 0.0000
20 K H -0.8585
21 I H 0.0000
22 S H -0.7775
23 C H 0.0000
24 K H -1.9238
25 T H 0.0000
26 S H -1.2813
27 G H -0.9941
28 F H -0.2994
29 T H -0.0426
30 F H 0.0000
35 T H -0.6160
36 S H -0.1919
37 Y H 0.2481
38 D H 0.0000
39 I H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -0.8936
45 R H -1.7536
46 P H -1.0449
47 G H -1.2524
48 Q H -1.5573
49 G H -1.1307
50 L H 0.0000
51 E H -0.8923
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 W H 0.1773
56 I H 0.0000
57 Y H -0.2265
58 P H 0.0000
59 G H -1.2158
62 D H -2.1102
63 G H -1.3763
64 S H -0.7733
65 T H -0.4291
66 K H -0.7338
67 Y H -1.5013
68 N H 0.0000
69 E H -3.6879
70 K H -3.3742
71 F H 0.0000
72 K H -3.8094
74 D H -3.3445
75 K H -2.1103
76 A H 0.0000
77 T H -0.8669
78 L H 0.0000
79 T H -0.3599
80 A H -0.9323
81 D H -1.3635
82 K H -1.9085
83 S H -1.0309
84 S H -0.9577
85 S H -1.0951
86 T H 0.0000
87 A H 0.0000
88 Y H -0.3217
89 M H 0.0000
90 Q H -0.4223
91 L H 0.0000
92 S H -0.3219
93 S H -0.5170
94 L H 0.0000
95 T H -1.0655
96 S H -1.4269
97 D H -2.0958
98 N H 0.0000
99 S H -0.5772
100 A H 0.0000
101 V H 0.2523
102 Y H 0.0000
103 F H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 Q H 0.0000
108 H H 0.0937
109 Y H 0.4590
110 G H 0.2165
111 Y H 0.9054
112A G H 0.0202
112 D H 0.0539
113 G H 0.0000
114 A H 0.0000
115 F H 0.0000
116 V H 0.0000
117 Y H -0.0696
118 W H -0.4708
119 G H 0.0000
120 Q H -1.7755
121 G H -0.7095
122 T H 0.0000
123 L H 0.9637
124 V H 0.0000
125 T H 0.2053
126 V H 0.0000
127 S H -0.4465
128 T H -0.5418
1 D L -1.6098
2 I L 0.0000
3 V L 0.6854
4 M L 0.0000
5 S L -0.7405
6 Q L -0.7965
7 S L -0.8699
8 P L -0.5841
9 S L -0.7056
10 S L -0.7223
11 L L -0.4501
12 A L -0.5684
13 V L 0.0000
14 S L -0.9801
15 V L -0.2026
16 G L -1.0063
17 E L -2.3419
18 K L -2.5248
19 V L 0.0000
20 T L -0.4685
21 M L 0.0000
22 S L -0.9078
23 C L 0.0000
24 K L -2.1454
25 S L 0.0000
26 S L -0.9376
27 Q L -1.4726
28 S L -1.0039
29 L L 0.0000
30 L L -0.7230
31 H L -1.2835
32 S L -1.3454
33 S L -1.3452
34 N L -2.0923
35 Q L -2.1455
36 N L -1.4713
37 N L -0.6470
38 Y L 0.0115
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -0.8135
45 K L -1.1921
46 P L -0.8990
47 G L -1.4145
48 Q L -2.0099
49 S L -1.2760
50 P L 0.0000
51 K L -0.7496
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.1632
56 W L -0.3425
57 A L 0.0000
65 S L -0.6034
66 T L -0.6267
67 R L -1.5355
68 E L 0.0000
69 S L -0.7052
70 G L -0.9023
71 V L -0.9739
72 P L -1.2655
74 D L -2.1402
75 R L -1.4854
76 F L 0.0000
77 T L -0.7516
78 G L 0.0000
79 S L -0.5777
80 G L -1.0334
83 S L -1.0436
84 G L -1.1394
85 T L -1.5443
86 D L -2.1105
87 F L 0.0000
88 T L -0.7365
89 L L 0.0000
90 T L -0.5049
91 I L 0.0000
92 S L -1.6910
93 S L -1.6680
94 V L 0.0000
95 K L -1.2315
96 A L -0.8616
97 E L -1.5973
98 D L 0.0000
99 L L -0.1733
100 A L 0.0000
101 V L -0.3644
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 Y L 0.5123
109 S L 0.2428
114 Y L 0.0184
115 P L 0.0000
116 R L 0.0000
117 T L 0.0340
118 F L 0.0000
119 G L 0.0000
120 G L -0.7476
121 G L 0.0000
122 T L 0.0000
123 K L -1.0676
124 L L 0.0000
125 E L -0.9390
126 I L -0.7164
127 K L -1.4584
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Laboratory of Theory of Biopolymers 2018