Project name: 16abn

Status: done

Started: 2024-06-18 19:23:05
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Chain sequence(s) A: KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGIILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:07)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:07)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:07)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:07)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:07)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:57)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:57)
Show buried residues

Minimal score value
-3.1402
Maximal score value
0.2208
Average score
-1.1344
Total score value
-146.3337

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -1.3920
2 V A 0.1251
3 F A 0.0000
4 G A -0.9802
5 R A -1.2282
6 C A -1.0331
7 E A -1.1064
8 L A 0.0000
9 A A 0.0000
10 A A -1.1761
11 A A -1.3833
12 M A 0.0000
13 K A -1.9867
14 R A -2.4145
15 H A -1.9316
16 G A -1.8240
17 L A 0.0000
18 D A -1.9944
19 N A -2.1295
20 Y A -1.6668
21 R A -2.3448
22 G A -1.7655
23 Y A -1.1762
24 S A -1.2465
25 L A 0.0000
26 G A 0.0000
27 N A -1.0811
28 W A 0.0000
29 V A 0.0000
30 C A 0.0000
31 A A 0.0000
32 A A 0.0000
33 K A -1.3115
34 F A -0.7727
35 E A -0.7538
36 S A 0.0000
37 N A -1.3860
38 F A 0.0000
39 N A -1.0953
40 T A 0.0000
41 Q A -1.4346
42 A A -1.1540
43 T A -1.3754
44 N A -1.9708
45 R A -2.7868
46 N A -2.2999
47 T A -1.6401
48 D A -2.5021
49 G A -2.1420
50 S A 0.0000
51 T A 0.0000
52 D A -1.4306
53 Y A 0.0000
54 G A 0.0000
55 I A 0.0000
56 L A 0.0000
57 Q A -0.6200
58 I A 0.0000
59 N A -1.3970
60 S A 0.0000
61 R A -2.5880
62 W A -0.7233
63 W A -0.9416
64 C A 0.0000
65 N A -2.6432
66 D A -2.2737
67 G A -1.8359
68 R A -2.3541
69 T A -2.2808
70 P A -1.7386
71 G A -1.3793
72 S A -2.1682
73 R A -2.4932
74 N A -1.7679
75 L A -0.6399
76 C A -0.9943
77 N A -1.5106
78 I A -0.7991
79 P A -1.1173
80 C A 0.0000
81 S A -0.6179
82 A A -0.4639
83 L A 0.0000
84 L A -1.0379
85 S A -1.3403
86 S A -1.5798
87 D A -2.1133
88 I A 0.0000
89 T A -1.2115
90 A A -0.8682
91 S A 0.0000
92 V A 0.0000
93 N A -1.7473
94 C A 0.0000
95 A A 0.0000
96 K A -1.9131
97 K A -2.1255
98 I A 0.0000
99 V A 0.0000
100 S A -2.2699
101 D A -2.7726
102 G A -2.1548
103 N A -2.1378
104 G A -1.9191
105 M A 0.0000
106 N A -1.3268
107 A A -0.6574
108 W A 0.0000
109 V A 0.2208
110 A A -0.9882
111 W A 0.0000
112 R A -3.0315
113 N A -2.9569
114 R A -3.1402
115 C A 0.0000
116 K A -3.1199
117 G A -2.2372
118 T A -2.3828
119 D A -2.4559
120 V A 0.0000
121 Q A -2.0528
122 A A -1.5774
123 W A -1.0530
124 I A -1.0325
125 R A -2.2004
126 G A -1.3880
127 C A -1.1976
128 R A -1.4498
129 L A 0.0241
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Laboratory of Theory of Biopolymers 2018