| Chain sequence(s) |
L: CAGGGGASAGGGAVSC
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 466 | C | L | 0.9192 | |
| 467 | A | L | 0.2206 | |
| 468 | G | L | -0.3195 | |
| 469 | G | L | -0.5951 | |
| 470 | G | L | -0.6354 | |
| 471 | G | L | -0.5408 | |
| 472 | A | L | -0.0904 | |
| 473 | S | L | -0.1914 | |
| 474 | A | L | -0.0646 | |
| 475 | G | L | -0.5410 | |
| 476 | G | L | -0.6367 | |
| 477 | G | L | -0.5407 | |
| 478 | A | L | 0.2958 | |
| 479 | V | L | 1.7448 | |
| 480 | S | L | 0.2893 | |
| 481 | C | L | 0.8646 |