Project name: query_structure

Status: done

Started: 2026-03-16 23:27:40
Settings
Chain sequence(s) A: GPSFCKADEKPCEYHADCCNCCLSGICAPSTNWILPGC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:37)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:38)
Show buried residues

Minimal score value
-3.3172
Maximal score value
3.0957
Average score
-0.4483
Total score value
-17.0346

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.4997
2 P A -0.3752
3 S A -0.1081
4 F A 0.4980
5 C A 0.0880
6 K A -1.8679
7 A A -2.0924
8 D A -3.0169
9 E A -3.3172
10 K A -3.1275
11 P A -1.7796
12 C A -1.5093
13 E A -1.5988
14 Y A -0.1637
15 H A -0.6107
16 A A -0.5760
17 D A -1.8744
18 C A 0.0000
19 C A 0.1935
20 N A -0.2474
21 C A -0.2742
22 C A 0.0000
23 L A -0.2439
24 S A -0.5069
25 G A -1.1226
26 I A -1.4644
27 C A 0.0000
28 A A -1.2820
29 P A -0.6824
30 S A -0.3391
31 T A -0.1067
32 N A 0.7484
33 W A 2.2167
34 I A 3.0957
35 L A 2.5830
36 P A 1.1270
37 G A 0.4364
38 C A 0.7657
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Laboratory of Theory of Biopolymers 2018