| Chain sequence(s) |
A: PSAVNMTPPAVNMTPSAVNMTPPAVNMT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:04)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | A | -0.0992 | |
| 2 | S | A | -0.0150 | |
| 3 | A | A | 0.4930 | |
| 4 | V | A | 1.3741 | |
| 5 | N | A | 0.0551 | |
| 6 | M | A | 0.7824 | |
| 7 | T | A | 0.1535 | |
| 8 | P | A | -0.0258 | |
| 9 | P | A | 0.1050 | |
| 10 | A | A | 0.4751 | |
| 11 | V | A | 1.3568 | |
| 12 | N | A | 0.0456 | |
| 13 | M | A | 0.7777 | |
| 14 | T | A | 0.1295 | |
| 15 | P | A | 0.0280 | |
| 16 | S | A | 0.1215 | |
| 17 | A | A | 0.4780 | |
| 18 | V | A | 1.4085 | |
| 19 | N | A | 0.0415 | |
| 20 | M | A | 0.8232 | |
| 21 | T | A | 0.1227 | |
| 22 | P | A | -0.0034 | |
| 23 | P | A | 0.1548 | |
| 24 | A | A | 0.4966 | |
| 25 | V | A | 1.3666 | |
| 26 | N | A | 0.0469 | |
| 27 | M | A | 0.8987 | |
| 28 | T | A | 0.2694 |