| Chain sequence(s) |
A: AKVAAWTLKAAACEAAAKVARAGGNSDATAGPGPGQADWDTGHRIDTAGPREGPGPGERVNGRIPLPVDWRWPWGGPGPGDDYEGIGGHESFRGPGPGLAAGSIKPIRGDILELRWHEANGPGPGSIKPIRGDILELRWHGPGPGRNTIERISRRFGIRVGPGPGELRWHEANNHFRVLFGPGPGRGDILELRWHEANNHGPGPGATAEIAAALAARQADAAYIPLPVDWRWAAYLPVDWRWPWAAYMADRIVARAAYLVLEVPTLRAAYSVDGRPVFK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:32)
[INFO] Main: Simulation completed successfully. (00:03:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.0331 | |
| 2 | K | A | -0.4995 | |
| 3 | V | A | 1.4230 | |
| 4 | A | A | 0.9193 | |
| 5 | A | A | 0.7060 | |
| 6 | W | A | 1.2982 | |
| 7 | T | A | 1.0838 | |
| 8 | L | A | 1.3051 | |
| 9 | K | A | -0.3531 | |
| 10 | A | A | -0.1383 | |
| 11 | A | A | -0.1123 | |
| 12 | A | A | -0.3229 | |
| 13 | C | A | -0.5212 | |
| 14 | E | A | -1.6412 | |
| 15 | A | A | -0.8355 | |
| 16 | A | A | -0.3892 | |
| 17 | A | A | -1.0860 | |
| 18 | K | A | -1.8326 | |
| 19 | V | A | 0.0232 | |
| 20 | A | A | -0.9210 | |
| 21 | R | A | -2.2386 | |
| 22 | A | A | -1.2885 | |
| 23 | G | A | -1.4407 | |
| 24 | G | A | -1.8445 | |
| 25 | N | A | -2.4069 | |
| 26 | S | A | -1.9266 | |
| 27 | D | A | -2.2404 | |
| 28 | A | A | -1.0756 | |
| 29 | T | A | -0.6337 | |
| 30 | A | A | -0.4776 | |
| 31 | G | A | -0.7070 | |
| 32 | P | A | -0.8047 | |
| 33 | G | A | -0.9127 | |
| 34 | P | A | -1.0589 | |
| 35 | G | A | -1.4873 | |
| 36 | Q | A | -1.7551 | |
| 37 | A | A | -1.4659 | |
| 38 | D | A | -1.9646 | |
| 39 | W | A | -0.6883 | |
| 40 | D | A | -2.0835 | |
| 41 | T | A | -1.3691 | |
| 42 | G | A | -1.6485 | |
| 43 | H | A | -2.0275 | |
| 44 | R | A | -2.1186 | |
| 45 | I | A | -0.0771 | |
| 46 | D | A | -1.4575 | |
| 47 | T | A | -0.7956 | |
| 48 | A | A | -0.7739 | |
| 49 | G | A | -1.4369 | |
| 50 | P | A | -1.9449 | |
| 51 | R | A | -3.1154 | |
| 52 | E | A | -3.1901 | |
| 53 | G | A | -2.1326 | |
| 54 | P | A | -1.7611 | |
| 55 | G | A | -1.5569 | |
| 56 | P | A | -1.5435 | |
| 57 | G | A | -1.9185 | |
| 58 | E | A | -2.9173 | |
| 59 | R | A | -2.5356 | |
| 60 | V | A | -0.6217 | |
| 61 | N | A | -1.6038 | |
| 62 | G | A | -1.6715 | |
| 63 | R | A | -1.2822 | |
| 64 | I | A | 1.0117 | |
| 65 | P | A | 0.8145 | |
| 66 | L | A | 1.8287 | |
| 67 | P | A | 1.1902 | |
| 68 | V | A | 1.2243 | |
| 69 | D | A | -0.6019 | |
| 70 | W | A | 0.0761 | |
| 71 | R | A | -0.9252 | |
| 72 | W | A | 0.4465 | |
| 73 | P | A | 0.3738 | |
| 74 | W | A | 0.8470 | |
| 75 | G | A | -0.0516 | |
| 76 | G | A | -0.7068 | |
| 77 | P | A | -0.9187 | |
| 78 | G | A | -1.3135 | |
| 79 | P | A | -1.5537 | |
| 80 | G | A | -1.9246 | |
| 81 | D | A | -2.9128 | |
| 82 | D | A | -2.7261 | |
| 83 | Y | A | -0.8853 | |
| 84 | E | A | -1.9048 | |
| 85 | G | A | -0.2917 | |
| 86 | I | A | 0.8041 | |
| 87 | G | A | -0.5985 | |
| 88 | G | A | -1.2632 | |
| 89 | H | A | -1.7498 | |
| 90 | E | A | -2.3485 | |
| 91 | S | A | -0.9576 | |
| 92 | F | A | 0.2806 | |
| 93 | R | A | -1.4442 | |
| 94 | G | A | -0.8570 | |
| 95 | P | A | -0.6611 | |
| 96 | G | A | -0.8467 | |
| 97 | P | A | -0.6159 | |
| 98 | G | A | -0.4552 | |
| 99 | L | A | 0.4029 | |
| 100 | A | A | -0.2934 | |
| 101 | A | A | -0.3136 | |
| 102 | G | A | -0.6518 | |
| 103 | S | A | -0.2116 | |
| 104 | I | A | 0.9387 | |
| 105 | K | A | -0.3648 | |
| 106 | P | A | -0.6330 | |
| 107 | I | A | -0.9301 | |
| 108 | R | A | -2.3802 | |
| 109 | G | A | -1.9049 | |
| 110 | D | A | -2.2741 | |
| 111 | I | A | -0.9515 | |
| 112 | L | A | 0.3143 | |
| 113 | E | A | 0.0000 | |
| 114 | L | A | -0.2691 | |
| 115 | R | A | -1.5327 | |
| 116 | W | A | 0.0000 | |
| 117 | H | A | -1.4824 | |
| 118 | E | A | -1.5754 | |
| 119 | A | A | -1.1392 | |
| 120 | N | A | -1.8159 | |
| 121 | G | A | -1.6927 | |
| 122 | P | A | -1.3976 | |
| 123 | G | A | -1.3798 | |
| 124 | P | A | -1.5272 | |
| 125 | G | A | 0.0000 | |
| 126 | S | A | -1.7721 | |
| 127 | I | A | 0.0000 | |
| 128 | K | A | -1.3997 | |
| 129 | P | A | -0.6396 | |
| 130 | I | A | -0.0955 | |
| 131 | R | A | -1.9944 | |
| 132 | G | A | -1.6648 | |
| 133 | D | A | -1.8246 | |
| 134 | I | A | -0.5119 | |
| 135 | L | A | -0.4390 | |
| 136 | E | A | -1.0482 | |
| 137 | L | A | -1.2332 | |
| 138 | R | A | -2.4630 | |
| 139 | W | A | -1.6323 | |
| 140 | H | A | -1.8300 | |
| 141 | G | A | -1.4736 | |
| 142 | P | A | -1.0337 | |
| 143 | G | A | -1.4362 | |
| 144 | P | A | -1.4161 | |
| 145 | G | A | -1.9928 | |
| 146 | R | A | -3.0779 | |
| 147 | N | A | -2.8788 | |
| 148 | T | A | -2.1528 | |
| 149 | I | A | 0.0000 | |
| 150 | E | A | -3.2137 | |
| 151 | R | A | -2.6440 | |
| 152 | I | A | 0.0000 | |
| 153 | S | A | 0.0000 | |
| 154 | R | A | -3.2411 | |
| 155 | R | A | -2.7386 | |
| 156 | F | A | -1.2374 | |
| 157 | G | A | -1.6579 | |
| 158 | I | A | -1.0927 | |
| 159 | R | A | -1.6275 | |
| 160 | V | A | -0.3138 | |
| 161 | G | A | -0.3145 | |
| 162 | P | A | -0.6085 | |
| 163 | G | A | -0.5616 | |
| 164 | P | A | -0.5682 | |
| 165 | G | A | -0.3367 | |
| 166 | E | A | 0.0000 | |
| 167 | L | A | 0.0000 | |
| 168 | R | A | -1.8403 | |
| 169 | W | A | -2.2175 | |
| 170 | H | A | -2.8795 | |
| 171 | E | A | -3.0775 | |
| 172 | A | A | -1.8822 | |
| 173 | N | A | -2.1603 | |
| 174 | N | A | -2.5563 | |
| 175 | H | A | -2.0535 | |
| 176 | F | A | -1.5344 | |
| 177 | R | A | -0.9211 | |
| 178 | V | A | 0.0894 | |
| 179 | L | A | 0.5419 | |
| 180 | F | A | 0.8056 | |
| 181 | G | A | -0.6833 | |
| 182 | P | A | -1.3279 | |
| 183 | G | A | -1.4157 | |
| 184 | P | A | -1.4375 | |
| 185 | G | A | -2.0192 | |
| 186 | R | A | -2.8543 | |
| 187 | G | A | -1.9193 | |
| 188 | D | A | -1.6200 | |
| 189 | I | A | 0.7334 | |
| 190 | L | A | 0.1290 | |
| 191 | E | A | -1.5478 | |
| 192 | L | A | -1.1466 | |
| 193 | R | A | -2.2929 | |
| 194 | W | A | -1.5212 | |
| 195 | H | A | -2.2072 | |
| 196 | E | A | -3.0748 | |
| 197 | A | A | -2.0763 | |
| 198 | N | A | -3.0107 | |
| 199 | N | A | -2.7645 | |
| 200 | H | A | -2.5109 | |
| 201 | G | A | -1.6994 | |
| 202 | P | A | -1.2678 | |
| 203 | G | A | -0.9588 | |
| 204 | P | A | -0.7422 | |
| 205 | G | A | -0.8567 | |
| 206 | A | A | -0.5298 | |
| 207 | T | A | -0.2207 | |
| 208 | A | A | -0.3685 | |
| 209 | E | A | -0.6631 | |
| 210 | I | A | 1.5405 | |
| 211 | A | A | 1.0459 | |
| 212 | A | A | 0.3930 | |
| 213 | A | A | 0.4591 | |
| 214 | L | A | 0.9929 | |
| 215 | A | A | 0.0038 | |
| 216 | A | A | -1.0053 | |
| 217 | R | A | -2.3282 | |
| 218 | Q | A | -2.1396 | |
| 219 | A | A | -1.5876 | |
| 220 | D | A | -2.1215 | |
| 221 | A | A | -0.8911 | |
| 222 | A | A | 0.2735 | |
| 223 | Y | A | 2.1430 | |
| 224 | I | A | 2.6864 | |
| 225 | P | A | 1.9430 | |
| 226 | L | A | 2.2097 | |
| 227 | P | A | 1.1971 | |
| 228 | V | A | 1.3778 | |
| 229 | D | A | -0.5073 | |
| 230 | W | A | 0.2582 | |
| 231 | R | A | -0.7245 | |
| 232 | W | A | 1.0087 | |
| 233 | A | A | 0.9675 | |
| 234 | A | A | 0.9542 | |
| 235 | Y | A | 1.6625 | |
| 236 | L | A | 1.4381 | |
| 237 | P | A | 0.5835 | |
| 238 | V | A | 0.6366 | |
| 239 | D | A | -0.4498 | |
| 240 | W | A | 0.3383 | |
| 241 | R | A | -0.9048 | |
| 242 | W | A | 0.7220 | |
| 243 | P | A | 0.6776 | |
| 244 | W | A | 1.2245 | |
| 245 | A | A | 0.5934 | |
| 246 | A | A | 0.5112 | |
| 247 | Y | A | 0.8187 | |
| 248 | M | A | 0.4792 | |
| 249 | A | A | 0.0556 | |
| 250 | D | A | -1.3608 | |
| 251 | R | A | -1.6639 | |
| 252 | I | A | 0.2554 | |
| 253 | V | A | 0.7889 | |
| 254 | A | A | -0.2423 | |
| 255 | R | A | -0.4669 | |
| 256 | A | A | 1.0144 | |
| 257 | A | A | 1.5930 | |
| 258 | Y | A | 2.5017 | |
| 259 | L | A | 2.4905 | |
| 260 | V | A | 3.1459 | |
| 261 | L | A | 2.6510 | |
| 262 | E | A | 1.0239 | |
| 263 | V | A | 2.1172 | |
| 264 | P | A | 0.6912 | |
| 265 | T | A | 0.3443 | |
| 266 | L | A | 0.8858 | |
| 267 | R | A | -0.8171 | |
| 268 | A | A | -0.0968 | |
| 269 | A | A | 0.6294 | |
| 270 | Y | A | 1.0885 | |
| 271 | S | A | 0.4563 | |
| 272 | V | A | 0.7182 | |
| 273 | D | A | -1.6394 | |
| 274 | G | A | -1.3850 | |
| 275 | R | A | -1.7030 | |
| 276 | P | A | -0.1710 | |
| 277 | V | A | 1.7747 | |
| 278 | F | A | 1.7041 | |
| 279 | K | A | -0.3131 |