Project name: query_structure

Status: done

Started: 2026-03-17 01:27:44
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDAPAVTVVLYHITYGETGGNSPVQFFTVPGSKSTATISGLSPGVDYTITVYATYRLWGSWQYYYSSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:35)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:35)
Show buried residues

Minimal score value
-2.6338
Maximal score value
2.1617
Average score
-0.1279
Total score value
-12.2754

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.7416
2 S A 0.7599
3 S A 0.7161
4 V A 0.4197
5 P A 0.0000
6 T A -1.5953
7 K A -2.6338
8 L A 0.0000
9 E A -1.9260
10 V A 0.0849
11 V A 1.5212
12 A A 0.8802
13 A A 0.2924
14 T A -0.1997
15 P A -0.8002
16 T A -0.5313
17 S A -0.3237
18 L A 0.0000
19 L A 0.7151
20 I A 0.0000
21 S A -0.9660
22 W A 0.0000
23 D A -2.6153
24 A A -1.2686
25 P A -0.0457
26 A A 0.3265
27 V A 0.0000
28 T A 0.1096
29 V A 0.4940
30 V A 0.7805
31 L A 0.6256
32 Y A 0.0000
33 H A 0.6852
34 I A 0.0000
35 T A 1.0528
36 Y A 0.0000
37 G A 0.0000
38 E A -1.2441
39 T A -1.1648
40 G A -1.2036
41 G A -1.3153
42 N A -1.5269
43 S A -0.8431
44 P A 0.1227
45 V A 1.3651
46 Q A 1.0049
47 F A 2.1617
48 F A 1.2264
49 T A 0.6646
50 V A 0.0000
51 P A -0.4544
52 G A -0.3128
53 S A -0.9247
54 K A -2.0091
55 S A -1.3827
56 T A -0.7713
57 A A 0.0000
58 T A 0.2267
59 I A 0.0000
60 S A -0.4786
61 G A -0.6883
62 L A 0.0000
63 S A -0.8135
64 P A -0.9693
65 G A -1.0358
66 V A -0.8402
67 D A -1.7134
68 Y A 0.0000
69 T A -0.6897
70 I A 0.0000
71 T A 0.3076
72 V A 0.0000
73 Y A 0.5065
74 A A 0.0000
75 T A 0.0000
76 Y A 0.8177
77 R A -0.0213
78 L A 0.5924
79 W A 0.9198
80 G A 0.1765
81 S A 0.5225
82 W A 1.0290
83 Q A 0.4329
84 Y A 1.5128
85 Y A 1.4215
86 Y A 1.7039
87 S A 0.0000
88 S A 0.2543
89 P A 0.1454
90 I A 0.1269
91 S A -0.3506
92 I A -0.5252
93 N A -1.7039
94 Y A -1.4030
95 R A -2.2743
96 T A -1.1570
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Laboratory of Theory of Biopolymers 2018