Project name: G1G1

Status: done

Started: 2025-06-25 14:03:02
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Chain sequence(s) H: EVQLLESGGGLVQPGGSLRLSCAASGFTFSSSQLGWFRQAPGKEREFISAVTLVSRTHYADSVKGRFTISRDDSKNTLYLQMNSLKPEDTAMYYCVARAAWGTDYREQGYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:43)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:44)
Show buried residues

Minimal score value
-3.2819
Maximal score value
1.5395
Average score
-0.7333
Total score value
-88.7283

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0046
2 V H -0.9329
3 Q H -0.9571
4 L H 0.0000
5 L H 0.9403
6 E H -0.0396
7 S H -0.4694
8 G H -1.0742
9 G H -0.6381
11 G H 0.1851
12 L H 1.1003
13 V H -0.0050
14 Q H -1.3496
15 P H -1.6325
16 G H -1.4228
17 G H -0.9355
18 S H -1.1081
19 L H -0.6723
20 R H -1.5757
21 L H 0.0000
22 S H -0.3324
23 C H 0.0000
24 A H -0.1459
25 A H -0.5046
26 S H -0.7437
27 G H -1.0250
28 F H -0.3828
29 T H -0.2227
30 F H 0.0000
35 S H -0.0999
36 S H 0.2012
37 S H 0.0000
38 Q H 0.0486
39 L H 0.0000
40 G H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -1.7752
45 A H -1.8123
46 P H -1.3118
47 G H -1.8286
48 K H -3.1982
49 E H -3.2819
50 R H -2.1341
51 E H -1.5232
52 F H -0.2014
53 I H 0.0000
54 S H 0.0000
55 A H -0.5401
56 V H 0.0000
57 T H 0.1045
58 L H 1.1820
59 V H 1.5395
63 S H -0.0703
64 R H -1.4605
65 T H -1.0894
66 H H -1.5496
67 Y H -1.0934
68 A H -1.4340
69 D H -2.6084
70 S H -1.7617
71 V H 0.0000
72 K H -2.7610
74 G H -1.7728
75 R H -1.6756
76 F H 0.0000
77 T H -0.9242
78 I H 0.0000
79 S H -0.5852
80 R H -0.9290
81 D H -1.6365
82 D H -1.9988
83 S H -1.7771
84 K H -2.5160
85 N H -2.0086
86 T H -1.1304
87 L H 0.0000
88 Y H -0.4856
89 L H 0.0000
90 Q H -1.0922
91 M H 0.0000
92 N H -1.3495
93 S H -1.2501
94 L H 0.0000
95 K H -2.4896
96 P H -1.9959
97 E H -2.4059
98 D H 0.0000
99 T H -0.9024
100 A H 0.0000
101 M H -0.4237
102 Y H 0.0000
103 Y H -0.0037
104 C H 0.0000
105 V H 0.0000
106 A H 0.0000
107 R H 0.0000
108 A H -0.5122
109 A H -0.5546
110 W H -0.5284
111 G H -0.6562
111A T H -0.8729
112A D H -1.7378
112 Y H -0.7246
113 R H -2.0750
114 E H -1.7107
115 Q H -1.5339
116 G H -0.6869
117 Y H 0.4899
118 W H 0.5266
119 G H 0.0298
120 Q H -0.8993
121 G H -0.5155
122 T H -0.6572
123 Q H -0.7304
124 V H 0.0000
125 T H -0.2600
126 V H 0.0000
127 S H -0.7957
128 S H -0.5625
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Laboratory of Theory of Biopolymers 2018