| Chain sequence(s) |
A: IVIVKGHE
C: IVIVKGHE B: IVIVKGHE E: IVIVKGHE D: IVIVKGHE G: IVIVKGHE F: IVIVKGHE H: IVIVKGHE input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:54)
[INFO] Main: Simulation completed successfully. (00:02:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 3.3306 | |
| 2 | V | A | 3.7731 | |
| 3 | I | A | 2.3925 | |
| 4 | V | A | 1.4635 | |
| 5 | K | A | -1.5728 | |
| 6 | G | A | -2.2376 | |
| 7 | H | A | -3.3109 | |
| 8 | E | A | -3.4012 | |
| 1 | I | B | 3.3159 | |
| 2 | V | B | 3.9647 | |
| 3 | I | B | 0.0000 | |
| 4 | V | B | 1.3621 | |
| 5 | K | B | -1.1513 | |
| 6 | G | B | -2.6541 | |
| 7 | H | B | -4.0195 | |
| 8 | E | B | -4.1054 | |
| 1 | I | C | 3.1966 | |
| 2 | V | C | 3.7225 | |
| 3 | I | C | 0.0000 | |
| 4 | V | C | 1.7214 | |
| 5 | K | C | -1.2793 | |
| 6 | G | C | -2.2132 | |
| 7 | H | C | -3.3241 | |
| 8 | E | C | -3.4251 | |
| 1 | I | D | 3.3497 | |
| 2 | V | D | 3.9526 | |
| 3 | I | D | 2.7730 | |
| 4 | V | D | 1.9034 | |
| 5 | K | D | -0.8398 | |
| 6 | G | D | -1.9964 | |
| 7 | H | D | -3.0470 | |
| 8 | E | D | -3.1491 | |
| 1 | I | E | 2.5423 | |
| 2 | V | E | 3.2075 | |
| 3 | I | E | 0.0000 | |
| 4 | V | E | 1.2924 | |
| 5 | K | E | -0.9580 | |
| 6 | G | E | -2.1695 | |
| 7 | H | E | -3.3393 | |
| 8 | E | E | -3.7803 | |
| 1 | I | F | 2.1883 | |
| 2 | V | F | 2.6402 | |
| 3 | I | F | 0.0000 | |
| 4 | V | F | 1.2084 | |
| 5 | K | F | -0.9996 | |
| 6 | G | F | -1.9440 | |
| 7 | H | F | -3.2056 | |
| 8 | E | F | -3.6617 | |
| 1 | I | G | 2.8069 | |
| 2 | V | G | 3.4223 | |
| 3 | I | G | 0.0000 | |
| 4 | V | G | 1.4663 | |
| 5 | K | G | -0.7584 | |
| 6 | G | G | -2.2323 | |
| 7 | H | G | -3.4340 | |
| 8 | E | G | -3.8195 | |
| 1 | I | H | 3.6179 | |
| 2 | V | H | 4.1278 | |
| 3 | I | H | 3.1658 | |
| 4 | V | H | 1.8174 | |
| 5 | K | H | -1.2070 | |
| 6 | G | H | -2.0836 | |
| 7 | H | H | -3.1165 | |
| 8 | E | H | -3.1425 |