Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB |
Selected Chain(s) | C |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | KR76C,LM45C,QT82C,WH47C,LS86C,SG25C,TV28C,TD69C,IP93C,TI58C,GD8C,QR3C,TE114C,GC10C,DH101C,EW33C |
Energy difference between WT (input) and mutated protein (by FoldX) | 18.5079 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:24) [INFO] FoldX: Starting FoldX energy minimalization (00:03:49) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:17) [INFO] Main: Simulation completed successfully. (00:04:18) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | E | C | -2.1678 | |
2 | V | C | -1.2537 | |
3 | R | C | -2.1317 | mutated: QR3C |
4 | L | C | 0.0000 | |
5 | V | C | -0.2025 | |
6 | E | C | 0.0000 | |
7 | S | C | -0.8151 | |
8 | D | C | -1.4147 | mutated: GD8C |
9 | G | C | 0.0110 | |
10 | C | C | 1.5499 | mutated: GC10C |
11 | L | C | 1.8848 | |
12 | V | C | 0.1348 | |
13 | Q | C | -1.3563 | |
14 | P | C | -1.5021 | |
15 | G | C | -1.4286 | |
16 | G | C | -1.0478 | |
17 | S | C | -1.2419 | |
18 | L | C | 0.0000 | |
19 | R | C | -2.1294 | |
20 | L | C | 0.0000 | |
21 | S | C | -0.7755 | |
22 | C | C | 0.0000 | |
23 | A | C | -0.5622 | |
24 | A | C | 0.0000 | |
25 | G | C | -0.6754 | mutated: SG25C |
26 | D | C | 0.0000 | |
27 | F | C | 1.7214 | |
28 | V | C | 0.7193 | mutated: TV28C |
29 | F | C | 0.0000 | |
30 | R | C | -1.7453 | |
31 | S | C | -0.5570 | |
32 | Y | C | -0.5884 | |
33 | W | C | -0.1828 | mutated: EW33C |
34 | M | C | 0.0000 | |
35 | S | C | 0.0000 | |
36 | W | C | 0.0000 | |
37 | V | C | 0.0000 | |
38 | R | C | 0.0000 | |
39 | Q | C | -0.9197 | |
40 | A | C | -1.2744 | |
41 | P | C | -1.4043 | |
42 | G | C | -1.5027 | |
43 | K | C | -2.2803 | |
44 | G | C | -1.3577 | |
45 | M | C | -0.5004 | mutated: LM45C |
46 | E | C | -1.1435 | |
47 | H | C | -0.7343 | mutated: WH47C |
48 | V | C | 0.0000 | |
49 | S | C | 0.0000 | |
50 | A | C | 0.0000 | |
51 | I | C | 0.0000 | |
52 | S | C | 0.0337 | |
53 | G | C | -0.9036 | |
54 | S | C | -1.1157 | |
55 | G | C | -0.7037 | |
56 | G | C | -0.4496 | |
57 | S | C | 0.4607 | |
58 | I | C | 1.5579 | mutated: TI58C |
59 | Y | C | 1.4300 | |
60 | Y | C | -0.1972 | |
61 | A | C | -1.2652 | |
62 | D | C | -2.3036 | |
63 | S | C | -1.7130 | |
64 | V | C | 0.0000 | |
65 | K | C | -2.4855 | |
66 | G | C | -1.7930 | |
67 | R | C | 0.0000 | |
68 | F | C | 0.0000 | |
69 | D | C | -1.3489 | mutated: TD69C |
70 | I | C | 0.0000 | |
71 | S | C | -0.6409 | |
72 | R | C | -1.4346 | |
73 | D | C | -2.0499 | |
74 | N | C | -2.1809 | |
75 | S | C | -1.8579 | |
76 | R | C | -2.4592 | mutated: KR76C |
77 | N | C | -1.7104 | |
78 | T | C | 0.0000 | |
79 | L | C | 0.0000 | |
80 | Y | C | 0.0000 | |
81 | L | C | 0.0000 | |
82 | T | C | -1.2321 | mutated: QT82C |
83 | M | C | 0.0000 | |
84 | N | C | -1.4208 | |
85 | S | C | -1.2667 | |
86 | S | C | 0.0000 | mutated: LS86C |
87 | R | C | -2.4804 | |
88 | A | C | -1.8930 | |
89 | E | C | -2.3450 | |
90 | D | C | 0.0000 | |
91 | T | C | -0.4642 | |
92 | A | C | 0.0000 | |
93 | P | C | 0.2922 | mutated: IP93C |
94 | Y | C | 0.0000 | |
95 | Y | C | 0.0953 | |
96 | C | C | 0.0000 | |
97 | A | C | 0.0000 | |
98 | R | C | 0.0000 | |
99 | L | C | 0.0000 | |
100 | R | C | -2.6927 | |
101 | H | C | -2.4365 | mutated: DH101C |
102 | G | C | -1.6177 | |
103 | F | C | -1.0649 | |
104 | N | C | -2.3831 | |
105 | K | C | -3.0127 | |
106 | G | C | -1.8148 | |
107 | F | C | -0.8560 | |
108 | D | C | -0.9929 | |
109 | Y | C | -0.3979 | |
110 | W | C | 0.2184 | |
111 | G | C | -0.5112 | |
112 | Q | C | -1.2874 | |
113 | G | C | -0.3925 | |
114 | E | C | -0.1652 | mutated: TE114C |
115 | L | C | 1.4196 | |
116 | V | C | 0.0000 | |
117 | T | C | 0.5118 | |
118 | V | C | 0.0000 | |
119 | S | C | -0.7805 | |
120 | S | C | -1.0628 |