Project name: ef343902ae26338

Status: done

Started: 2026-05-21 15:59:46
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Chain sequence(s) A: FGGHKFG
C: FGGHKFG
B: FGGHKFG
E: FGGHKFG
D: FGGHKFG
G: FGGHKFG
F: FGGHKFG
I: FGGHKFG
H: FGGHKFG
K: FGGHKFG
J: FGGHKFG
L: FGGHKFG
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:16)
Show buried residues

Minimal score value
-2.5207
Maximal score value
1.8316
Average score
-0.4758
Total score value
-39.9693

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 1.0571
2 G A 0.1475
3 G A -0.5652
4 H A 0.0000
5 K A -1.7489
6 F A 0.0000
7 G A -1.3021
1 F B 1.1956
2 G B 0.2331
3 G B -0.8049
4 H B 0.0000
5 K B -2.1238
6 F B 0.0000
7 G B -1.3760
1 F C 1.8213
2 G C 0.0919
3 G C -0.9189
4 H C -1.0788
5 K C -2.4093
6 F C -0.8842
7 G C -0.9455
1 F D 1.5300
2 G D -0.0506
3 G D -1.0437
4 H D -1.3274
5 K D -2.5207
6 F D -0.8904
7 G D -0.8692
1 F E 1.0553
2 G E -0.0251
3 G E -0.9092
4 H E 0.0000
5 K E -2.3384
6 F E 0.0000
7 G E -1.3636
1 F F 0.7449
2 G F -0.0319
3 G F -0.7986
4 H F 0.0000
5 K F -2.3575
6 F F 0.0000
7 G F -1.4373
1 F G 0.8362
2 G G 0.1070
3 G G -0.7579
4 H G 0.0000
5 K G -2.1403
6 F G 0.0000
7 G G -1.4574
1 F H 1.1361
2 G H 0.0586
3 G H -0.8850
4 H H 0.0000
5 K H -2.2607
6 F H 0.0000
7 G H -1.2889
1 F I 1.8316
2 G I 0.0473
3 G I -0.9203
4 H I -0.9930
5 K I -2.1324
6 F I -0.4185
7 G I -0.6872
1 F J 1.7872
2 G J 0.0999
3 G J -0.9261
4 H J -0.9982
5 K J -2.1078
6 F J -0.3058
7 G J -0.6752
1 F K 1.2751
2 G K 0.0826
3 G K -0.8218
4 H K 0.0000
5 K K -1.8241
6 F K 0.0000
7 G K -1.1526
1 F L 1.0855
2 G L 0.2131
3 G L -0.5714
4 H L 0.0000
5 K L -1.7466
6 F L 0.0000
7 G L -1.2138
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Laboratory of Theory of Biopolymers 2018