| Chain sequence(s) |
A: FGGHKFG
C: FGGHKFG B: FGGHKFG E: FGGHKFG D: FGGHKFG G: FGGHKFG F: FGGHKFG I: FGGHKFG H: FGGHKFG K: FGGHKFG J: FGGHKFG L: FGGHKFG input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:13)
[INFO] Main: Simulation completed successfully. (00:02:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 1.0571 | |
| 2 | G | A | 0.1475 | |
| 3 | G | A | -0.5652 | |
| 4 | H | A | 0.0000 | |
| 5 | K | A | -1.7489 | |
| 6 | F | A | 0.0000 | |
| 7 | G | A | -1.3021 | |
| 1 | F | B | 1.1956 | |
| 2 | G | B | 0.2331 | |
| 3 | G | B | -0.8049 | |
| 4 | H | B | 0.0000 | |
| 5 | K | B | -2.1238 | |
| 6 | F | B | 0.0000 | |
| 7 | G | B | -1.3760 | |
| 1 | F | C | 1.8213 | |
| 2 | G | C | 0.0919 | |
| 3 | G | C | -0.9189 | |
| 4 | H | C | -1.0788 | |
| 5 | K | C | -2.4093 | |
| 6 | F | C | -0.8842 | |
| 7 | G | C | -0.9455 | |
| 1 | F | D | 1.5300 | |
| 2 | G | D | -0.0506 | |
| 3 | G | D | -1.0437 | |
| 4 | H | D | -1.3274 | |
| 5 | K | D | -2.5207 | |
| 6 | F | D | -0.8904 | |
| 7 | G | D | -0.8692 | |
| 1 | F | E | 1.0553 | |
| 2 | G | E | -0.0251 | |
| 3 | G | E | -0.9092 | |
| 4 | H | E | 0.0000 | |
| 5 | K | E | -2.3384 | |
| 6 | F | E | 0.0000 | |
| 7 | G | E | -1.3636 | |
| 1 | F | F | 0.7449 | |
| 2 | G | F | -0.0319 | |
| 3 | G | F | -0.7986 | |
| 4 | H | F | 0.0000 | |
| 5 | K | F | -2.3575 | |
| 6 | F | F | 0.0000 | |
| 7 | G | F | -1.4373 | |
| 1 | F | G | 0.8362 | |
| 2 | G | G | 0.1070 | |
| 3 | G | G | -0.7579 | |
| 4 | H | G | 0.0000 | |
| 5 | K | G | -2.1403 | |
| 6 | F | G | 0.0000 | |
| 7 | G | G | -1.4574 | |
| 1 | F | H | 1.1361 | |
| 2 | G | H | 0.0586 | |
| 3 | G | H | -0.8850 | |
| 4 | H | H | 0.0000 | |
| 5 | K | H | -2.2607 | |
| 6 | F | H | 0.0000 | |
| 7 | G | H | -1.2889 | |
| 1 | F | I | 1.8316 | |
| 2 | G | I | 0.0473 | |
| 3 | G | I | -0.9203 | |
| 4 | H | I | -0.9930 | |
| 5 | K | I | -2.1324 | |
| 6 | F | I | -0.4185 | |
| 7 | G | I | -0.6872 | |
| 1 | F | J | 1.7872 | |
| 2 | G | J | 0.0999 | |
| 3 | G | J | -0.9261 | |
| 4 | H | J | -0.9982 | |
| 5 | K | J | -2.1078 | |
| 6 | F | J | -0.3058 | |
| 7 | G | J | -0.6752 | |
| 1 | F | K | 1.2751 | |
| 2 | G | K | 0.0826 | |
| 3 | G | K | -0.8218 | |
| 4 | H | K | 0.0000 | |
| 5 | K | K | -1.8241 | |
| 6 | F | K | 0.0000 | |
| 7 | G | K | -1.1526 | |
| 1 | F | L | 1.0855 | |
| 2 | G | L | 0.2131 | |
| 3 | G | L | -0.5714 | |
| 4 | H | L | 0.0000 | |
| 5 | K | L | -1.7466 | |
| 6 | F | L | 0.0000 | |
| 7 | G | L | -1.2138 |