| Chain sequence(s) |
A: RNGFIPCGETCIWDKTCHAAGCSCSVANIC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:10)
[INFO] Main: Simulation completed successfully. (00:00:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -2.3667 | |
| 2 | N | A | -1.7997 | |
| 3 | G | A | -0.4498 | |
| 4 | F | A | 1.3562 | |
| 5 | I | A | 1.0534 | |
| 6 | P | A | 0.4875 | |
| 7 | C | A | 0.0775 | |
| 8 | G | A | -0.1208 | |
| 9 | E | A | -0.0943 | |
| 10 | T | A | 0.0491 | |
| 11 | C | A | 0.0000 | |
| 12 | I | A | 1.2817 | |
| 13 | W | A | 0.4910 | |
| 14 | D | A | -1.7521 | |
| 15 | K | A | -1.6594 | |
| 16 | T | A | -1.3028 | |
| 17 | C | A | -0.9140 | |
| 18 | H | A | -1.4585 | |
| 19 | A | A | -0.6731 | |
| 20 | A | A | -0.3693 | |
| 21 | G | A | -0.5434 | |
| 22 | C | A | -0.2853 | |
| 23 | S | A | -0.2794 | |
| 24 | C | A | -0.0240 | |
| 25 | S | A | 0.8457 | |
| 26 | V | A | 1.7526 | |
| 27 | A | A | 1.2161 | |
| 28 | N | A | 0.7735 | |
| 29 | I | A | 1.1046 | |
| 30 | C | A | 0.0000 |