Project name: query_structure

Status: done

Started: 2026-03-17 00:59:11
Settings
Chain sequence(s) A: RNGFIPCGETCIWDKTCHAAGCSCSVANIC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:10)
Show buried residues

Minimal score value
-2.3667
Maximal score value
1.7526
Average score
-0.1201
Total score value
-3.6037

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 R A -2.3667
2 N A -1.7997
3 G A -0.4498
4 F A 1.3562
5 I A 1.0534
6 P A 0.4875
7 C A 0.0775
8 G A -0.1208
9 E A -0.0943
10 T A 0.0491
11 C A 0.0000
12 I A 1.2817
13 W A 0.4910
14 D A -1.7521
15 K A -1.6594
16 T A -1.3028
17 C A -0.9140
18 H A -1.4585
19 A A -0.6731
20 A A -0.3693
21 G A -0.5434
22 C A -0.2853
23 S A -0.2794
24 C A -0.0240
25 S A 0.8457
26 V A 1.7526
27 A A 1.2161
28 N A 0.7735
29 I A 1.1046
30 C A 0.0000
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Laboratory of Theory of Biopolymers 2018