| Chain sequence(s) |
L: CDPTAPSPLEC
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:05)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 183 | C | L | 0.5632 | |
| 184 | D | L | -0.8354 | |
| 185 | P | L | -0.4324 | |
| 186 | T | L | -0.1144 | |
| 187 | A | L | -0.0475 | |
| 188 | P | L | -0.2643 | |
| 189 | S | L | -0.1377 | |
| 190 | P | L | 0.1703 | |
| 191 | L | L | 1.1882 | |
| 192 | E | L | -1.4253 | |
| 193 | C | L | 0.2930 |