Project name: efbe91f992a04b7

Status: done

Started: 2026-04-09 07:29:14
Settings
Chain sequence(s) H: VQLVQSGAEVKKPGASVTVSCKASGYTFTDYYMHWVRQAPGQGLEWMGWIKPNSGGTNSAQRFQGRITMTWDTSISTAYMELSRLRSDDTAVYYCSRGGPVMNYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPCTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV
L: NIQMTQSPSSLSASVGDRVTITCRASQSIDSYLNWYQQKPGKAPKLLIYVASSLQSGVPSRFSGSGSGKDFTLTISSLQPEDFATYYCQQSYSIPTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:06)
Show buried residues

Minimal score value
-3.4859
Maximal score value
2.0216
Average score
-0.6025
Total score value
-257.2516

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 V H 1.0925
3 Q H -0.2652
4 L H 0.0000
5 V H 0.4984
6 Q H -0.0638
7 S H -0.5338
8 G H -0.8009
9 A H -0.8110
10 E H -1.6479
11 V H -0.8022
12 K H -1.6192
13 K H -2.2965
14 P H -2.2737
15 G H -2.0555
16 A H -1.4677
17 S H -1.1017
18 V H 0.0000
19 T H -0.5226
20 V H 0.0000
21 S H -0.0507
22 C H 0.0000
23 K H -0.1885
24 A H 0.0000
25 S H 0.0731
26 G H -0.1882
27 Y H 0.0705
28 T H -0.2204
29 F H 0.0000
30 T H -1.0154
31 D H -1.0577
32 Y H -0.1043
33 Y H 0.0000
34 M H 0.0000
35 H H 0.0000
36 W H 0.0000
37 V H 0.0000
38 R H 0.0000
39 Q H -0.5094
40 A H -0.9662
41 P H -0.7966
42 G H -1.2265
43 Q H -1.7976
44 G H -1.2217
45 L H 0.0000
46 E H -0.4105
47 W H 0.0000
48 M H 0.0000
49 G H 0.0000
50 W H -0.0072
51 I H 0.0000
52 K H -0.8080
53 P H 0.0000
54 N H -1.6524
55 S H -1.1424
56 G H -1.0751
57 G H -0.8299
58 T H -0.5362
59 N H -0.8058
60 S H -1.2211
61 A H 0.0000
62 Q H -2.5590
63 R H -2.8995
64 F H 0.0000
65 Q H -2.4691
66 G H -2.0309
67 R H -1.6404
68 I H 0.0000
69 T H -0.5894
70 M H 0.0000
71 T H -0.1428
72 W H 0.0366
73 D H -0.1906
74 T H -0.0455
75 S H 0.4272
76 I H 1.3704
77 S H 0.3489
78 T H 0.0000
79 A H 0.0000
80 Y H 0.0423
81 M H 0.0000
82 E H -0.6691
83 L H 0.0000
84 S H -1.5307
85 R H -2.4782
86 L H 0.0000
87 R H -2.7147
88 S H -1.9769
89 D H -2.2968
90 D H 0.0000
91 T H -0.7293
92 A H 0.0000
93 V H 0.1844
94 Y H 0.0000
95 Y H 0.0000
96 C H 0.0000
97 S H 0.0000
98 R H -0.0251
99 G H 0.0000
100 G H 0.0000
101 P H 0.6421
102 V H 0.5759
103 M H 0.9227
104 N H 0.9080
105 Y H 1.9178
106 Y H 1.7692
107 Y H 2.0216
108 Y H 1.7864
109 Y H 1.1966
110 G H 0.0000
111 M H 0.0000
112 D H -0.7133
113 V H 0.0113
114 W H -0.3785
115 G H 0.0000
116 Q H -1.4202
117 G H -0.7601
118 T H 0.0000
119 T H -0.2639
120 V H 0.0000
121 T H -0.9754
122 V H 0.0000
123 S H -1.2349
124 S H -1.0402
125 A H -0.7355
126 S H -0.9250
127 T H -1.0253
128 K H -1.7403
129 G H -1.6778
130 P H -0.8274
131 S H -0.4173
132 V H 0.0000
133 F H -0.5464
134 P H -0.5706
135 L H 0.0000
136 A H 0.2796
137 P H 0.4165
138 C H 0.5971
146 T H -0.0419
147 A H 0.3249
148 A H 0.0000
149 L H 0.4557
150 G H 0.0000
151 C H 0.0000
152 L H 0.0000
153 V H 0.0000
154 K H -0.3868
155 D H -0.6041
156 Y H 0.0000
157 F H 0.0000
158 P H -0.9953
159 E H -1.4211
160 P H -1.1456
161 V H -0.1497
162 T H 0.2355
163 V H 1.4259
164 S H 0.6459
165 W H -0.1386
166 N H -0.3357
167 S H -0.0745
168 G H -0.1585
169 A H -0.1449
170 L H 0.1971
171 T H 0.0428
172 S H -0.2694
173 G H -0.5169
174 V H 0.3106
175 H H -0.3261
176 T H 0.0463
177 F H 0.0000
178 P H -0.0719
179 A H 0.3564
180 V H 0.7748
181 L H 1.5211
182 Q H 0.3402
183 S H -0.0526
184 S H -0.2006
185 G H 0.0652
186 L H 0.0010
187 Y H 0.3935
188 S H 0.0000
189 L H 0.3771
190 S H 0.0321
191 S H 0.0000
192 V H 0.0000
193 V H 0.5178
194 T H 0.3528
195 V H 0.2295
196 P H -0.1848
197 S H -0.2298
198 S H -0.2974
199 S H -0.3479
200 L H 0.0052
201 G H -0.5484
202 T H -0.5841
203 K H -0.8593
204 T H -0.6730
205 Y H -0.4302
206 T H -1.2295
207 C H 0.0000
208 N H -1.4502
209 V H 0.0000
210 D H -2.1506
211 H H 0.0000
212 K H -2.8406
213 P H -1.8640
214 S H -2.0237
215 N H -2.7222
216 T H -2.2613
217 K H -2.9426
218 V H -1.9859
219 D H -2.8215
220 K H -2.1532
221 R H -2.0818
222 V H -0.7305
1 N L -1.6357
2 I L 0.0000
3 Q L -1.9383
4 M L -1.4353
5 T L -1.2222
6 Q L 0.0000
7 S L -0.6301
8 P L -0.5383
9 S L -0.9357
10 S L -0.9115
11 L L -0.5597
12 S L -0.8487
13 A L -0.7227
14 S L -0.5319
15 V L 0.6455
16 G L -0.6565
17 D L -1.5481
18 R L -2.2764
19 V L 0.0000
20 T L -0.5144
21 I L 0.0000
22 T L -0.7842
23 C L 0.0000
24 R L -2.5175
25 A L 0.0000
26 S L -1.7843
27 Q L -2.1934
28 S L -1.7171
29 I L 0.0000
30 D L -1.9517
31 S L -0.7686
32 Y L 0.4066
33 L L 0.0000
34 N L 0.0000
35 W L 0.0000
36 Y L 0.0000
37 Q L 0.0000
38 Q L -1.3089
39 K L -1.5647
40 P L -1.4745
41 G L -1.6910
42 K L -2.5456
43 A L -1.5844
44 P L 0.0000
45 K L -1.5153
46 L L 0.0000
47 L L 0.0000
48 I L 0.0000
49 Y L 0.6589
50 V L 0.4901
51 A L 0.0000
52 S L -0.1311
53 S L 0.1976
54 L L 0.4190
55 Q L -0.1392
56 S L -0.4789
57 G L -0.5073
58 V L -0.3203
59 P L -0.3344
60 S L -0.4517
61 R L -0.8662
62 F L 0.0000
63 S L -0.3496
64 G L -0.1856
65 S L -0.6463
66 G L -1.4515
67 S L -1.8258
68 G L -2.1180
69 K L -2.7852
70 D L -2.7397
71 F L 0.0000
72 T L -0.7593
73 L L 0.0000
74 T L -0.6323
75 I L 0.0000
76 S L -1.5257
77 S L -1.1329
78 L L 0.0000
79 Q L -0.7466
80 P L -0.7378
81 E L -1.5071
82 D L 0.0000
83 F L -0.4472
84 A L 0.0000
85 T L -0.9745
86 Y L 0.0000
87 Y L 0.0000
88 C L 0.0000
89 Q L 0.0000
90 Q L 0.0000
91 S L 0.0000
92 Y L 1.3237
93 S L 0.6820
94 I L 0.1876
95 P L 0.3013
96 T L -0.2913
97 F L -0.3274
98 G L -0.9120
99 Q L -1.7515
100 G L 0.0000
101 T L 0.0000
102 R L -1.9904
103 L L 0.0000
104 E L -1.0844
105 I L -0.6203
106 K L -1.5554
107 R L -1.2132
108 T L 0.0671
109 V L 1.1774
110 A L 0.4225
111 A L 0.0377
112 P L -0.0355
113 S L -0.1348
114 V L 0.1288
115 F L 0.3828
116 I L 0.4265
117 F L 0.0000
118 P L 0.0000
119 P L -0.3258
120 S L -1.1687
121 D L -2.5475
122 E L -2.3300
123 Q L 0.0000
124 L L -1.9553
125 K L -2.6964
126 S L -1.7195
127 G L -1.4867
128 T L -1.1670
129 A L 0.0000
130 S L 0.0000
131 V L 0.0000
132 V L 0.0655
133 C L 0.0000
134 L L 0.0000
135 L L 0.0000
136 N L -0.4657
137 N L -1.3117
138 F L 0.0000
139 Y L 0.0000
140 P L -1.6587
141 R L -3.2654
142 E L -3.1658
143 A L -2.2563
144 K L -2.4080
145 V L -1.0533
146 Q L -1.1662
147 W L 0.0000
148 K L -0.9513
149 V L 0.0000
150 D L -1.4038
151 N L -1.2918
152 A L -0.4240
153 L L 0.4197
154 Q L -0.5720
155 S L -0.7667
156 G L -1.0669
157 N L -1.0523
158 S L -1.2997
159 Q L -1.2704
160 E L -1.8155
161 S L -0.7780
162 V L -0.8036
163 T L -1.1717
164 E L -2.3757
165 Q L -2.2022
166 D L -2.2999
167 S L -1.8458
168 K L -2.4259
169 D L -2.0256
170 S L -1.9851
171 T L 0.0000
172 Y L 0.0000
173 S L 0.0000
174 L L 0.0000
175 S L -0.3422
176 S L 0.0000
177 T L 0.0000
178 L L 0.0000
179 T L -0.2848
180 L L -0.7064
181 S L -1.3247
182 K L -2.2174
183 A L -2.0246
184 D L -3.0284
185 Y L -2.6683
186 E L -3.4859
187 K L -3.3726
188 H L -2.8216
189 K L -2.8390
190 V L -1.0123
191 Y L 0.0000
192 A L 0.0000
193 C L 0.0000
194 E L -0.9175
195 V L 0.0000
196 T L -1.1559
197 H L 0.0000
198 Q L -1.7444
199 G L -0.3039
200 L L -0.1687
201 S L -0.4601
202 S L -0.3855
203 P L -0.4014
204 V L 0.1966
205 T L -0.4695
206 K L -0.7041
207 S L -0.4754
208 F L 0.0000
209 N L -1.3029
210 R L -1.8242
211 G L -1.9122
212 E L -2.0264
213 C L -0.5754
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Laboratory of Theory of Biopolymers 2018