Project name: query_structure

Status: done

Started: 2026-03-16 21:41:47
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Chain sequence(s) A: MLPAPKNLVVSEVTEDSARLSWDDPWAFYESFLIQYQESEKVGEAIVLTVPGSERSYDLTGLKPGTEYTVSIYGVHNVYKDTNMRGLPLSAIFTTGGGGSGGGGSLAEAKVLANRELDKYGVSDYYKNLINAKTVEGVKALIDEILAALPGG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:43)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:43)
Show buried residues

Minimal score value
-3.5698
Maximal score value
1.8698
Average score
-0.8578
Total score value
-130.3842

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.1346
2 L A 0.7055
3 P A 0.3258
4 A A -0.1352
5 P A 0.0000
6 K A -1.8587
7 N A -1.5832
8 L A -0.2742
9 V A 1.1161
10 V A 0.5989
11 S A -0.7193
12 E A -1.9323
13 V A -1.1621
14 T A -1.9400
15 E A -3.1797
16 D A -3.1026
17 S A -2.3055
18 A A 0.0000
19 R A -1.6097
20 L A 0.0000
21 S A -0.6924
22 W A 0.0000
23 D A -1.9149
24 D A 0.0000
25 P A -0.2914
26 W A 0.6020
27 A A 0.1973
28 F A 0.2187
29 Y A 0.0000
30 E A -1.9078
31 S A -1.3782
32 F A 0.0000
33 L A 0.3334
34 I A 0.0000
35 Q A 0.4855
36 Y A 0.4444
37 Q A -0.7300
38 E A -1.7510
39 S A -1.4258
40 E A -2.6672
41 K A -2.3384
42 V A -0.1265
43 G A -1.1111
44 E A -1.5697
45 A A -0.2980
46 I A 0.8961
47 V A 1.5882
48 L A 1.2280
49 T A 0.3890
50 V A 0.0000
51 P A -1.0680
52 G A -1.2108
53 S A -1.1497
54 E A -1.6884
55 R A -1.4047
56 S A -0.9814
57 Y A -0.9515
58 D A -1.9666
59 L A 0.0000
60 T A -1.5903
61 G A -1.5826
62 L A 0.0000
63 K A -3.1841
64 P A -2.9563
65 G A -2.2355
66 T A -2.3090
67 E A -1.8356
68 Y A 0.0000
69 T A 0.1156
70 V A 0.0000
71 S A 0.0000
72 I A 0.0000
73 Y A 0.0000
74 G A 0.0000
75 V A 0.0000
76 H A -1.5329
77 N A -2.1304
78 V A -0.9010
79 Y A -0.2307
80 K A -2.2167
81 D A -2.7627
82 T A -1.9789
83 N A -2.4778
84 M A -0.9847
85 R A -1.2759
86 G A 0.0000
87 L A 0.8807
88 P A 0.0621
89 L A -0.0789
90 S A 0.3727
91 A A 1.1984
92 I A 1.8698
93 F A 0.0000
94 T A -0.8149
95 T A 0.0000
96 G A -2.1319
97 G A -2.2729
98 G A -2.1208
99 G A -1.2924
100 S A -1.1155
101 G A -1.2452
102 G A -1.6883
103 G A -1.4741
104 G A -1.1110
105 S A -0.8099
106 L A -0.9297
107 A A -0.5554
108 E A -1.1583
109 A A 0.0000
110 K A -1.0807
111 V A 0.6370
112 L A 0.0873
113 A A 0.0000
114 N A -2.0122
115 R A -2.6072
116 E A -2.3591
117 L A 0.0000
118 D A -3.5698
119 K A -2.8520
120 Y A -0.6561
121 G A -1.5260
122 V A 0.0000
123 S A -0.7271
124 D A -1.4660
125 Y A 0.7227
126 Y A 0.9648
127 K A -0.7422
128 N A -0.8315
129 L A 0.7202
130 I A 0.0000
131 N A -1.5712
132 A A -1.7074
133 K A -2.2466
134 T A -1.8029
135 V A -1.7459
136 E A -2.4430
137 G A -1.8272
138 V A 0.0000
139 K A -2.5448
140 A A -2.0246
141 L A -1.4858
142 I A 0.0000
143 D A -2.7117
144 E A -2.4444
145 I A -0.8113
146 L A -0.5492
147 A A -0.8276
148 A A -0.4163
149 L A 0.2704
150 P A -0.3043
151 G A -0.6425
152 G A -0.6025
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Laboratory of Theory of Biopolymers 2018