| Chain sequence(s) |
A: GIPCGESCVFIPCISSVVGCSCKSKVCYLD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:25)
[INFO] Main: Simulation completed successfully. (00:00:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1394 | |
| 2 | I | A | 1.5752 | |
| 3 | P | A | 0.5198 | |
| 4 | C | A | 0.7436 | |
| 5 | G | A | -0.1495 | |
| 6 | E | A | 0.1029 | |
| 7 | S | A | 0.4085 | |
| 8 | C | A | 1.0341 | |
| 9 | V | A | 1.6525 | |
| 10 | F | A | 2.7993 | |
| 11 | I | A | 2.8941 | |
| 12 | P | A | 1.5167 | |
| 13 | C | A | 0.0000 | |
| 14 | I | A | 2.6733 | |
| 15 | S | A | 2.0238 | |
| 16 | S | A | 1.8903 | |
| 17 | V | A | 2.8350 | |
| 18 | V | A | 2.5686 | |
| 19 | G | A | 0.9417 | |
| 20 | C | A | 0.0000 | |
| 21 | S | A | -0.1397 | |
| 22 | C | A | -0.6260 | |
| 23 | K | A | -1.8205 | |
| 24 | S | A | -1.4011 | |
| 25 | K | A | -1.4433 | |
| 26 | V | A | -0.6561 | |
| 27 | C | A | 0.0000 | |
| 28 | Y | A | 0.0377 | |
| 29 | L | A | 0.3848 | |
| 30 | D | A | -1.0371 |