Project name: query_structure

Status: done

Started: 2025-11-29 10:34:41
Settings
Chain sequence(s) A: GIPCGESCVFIPCISSVVGCSCKSKVCYLD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:25)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:25)
Show buried residues

Minimal score value
-1.8205
Maximal score value
2.8941
Average score
0.6396
Total score value
19.1892

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.1394
2 I A 1.5752
3 P A 0.5198
4 C A 0.7436
5 G A -0.1495
6 E A 0.1029
7 S A 0.4085
8 C A 1.0341
9 V A 1.6525
10 F A 2.7993
11 I A 2.8941
12 P A 1.5167
13 C A 0.0000
14 I A 2.6733
15 S A 2.0238
16 S A 1.8903
17 V A 2.8350
18 V A 2.5686
19 G A 0.9417
20 C A 0.0000
21 S A -0.1397
22 C A -0.6260
23 K A -1.8205
24 S A -1.4011
25 K A -1.4433
26 V A -0.6561
27 C A 0.0000
28 Y A 0.0377
29 L A 0.3848
30 D A -1.0371
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Laboratory of Theory of Biopolymers 2018