Project name: f00658b4b947b44

Status: done

Started: 2024-12-30 06:01:37
Settings
Chain sequence(s) D: MDVTIQHPWFKRTLGPFYPSRLFDQFFGEGLFEYDLLPFLSSTISPYYRQSLFRTVLDSGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQDDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTFCGPKIQTGLDATHAERAIPVSREEKPTSAPSS
input PDB
Selected Chain(s) D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with D chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:36)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:37)
Show buried residues

Minimal score value
-3.7711
Maximal score value
1.6643
Average score
-0.7825
Total score value
-135.3719

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M D 0.7628
2 D D 0.3334
3 V D 1.2487
4 T D 0.9848
5 I D 1.0049
6 Q D 0.2781
7 H D -0.5265
8 P D -0.5654
9 W D -0.1312
10 F D 0.0000
11 K D -2.1823
12 R D -2.1044
13 T D 0.0000
14 L D -0.7288
15 G D -1.1708
16 P D -0.5334
17 F D 0.0000
18 Y D 0.1583
19 P D -0.1445
20 S D -0.4865
21 R D -2.0732
22 L D -0.9606
23 F D 0.0000
24 D D -2.1737
25 Q D -2.1765
26 F D -1.0543
27 F D -1.0783
28 G D -1.5265
29 E D -1.9189
30 G D -0.8430
31 L D 1.0632
32 F D 1.5396
33 E D -0.2357
34 Y D 0.7481
35 D D -0.3558
36 L D 1.2634
37 L D 1.4248
38 P D 0.9142
39 F D 1.2407
40 L D 0.7255
41 S D 0.2229
42 S D 0.3830
43 T D 0.8075
44 I D 1.6643
45 S D 0.8141
46 P D 0.0000
47 Y D 0.0000
48 Y D -0.5498
49 R D -1.4371
50 Q D -1.1479
51 S D -0.0475
52 L D 1.5146
53 F D 0.0000
54 R D 0.1373
55 T D 0.5751
56 V D 1.5757
57 L D 0.3585
58 D D -0.4953
59 S D -0.0380
60 G D -0.1034
61 I D 1.2564
62 S D 0.0000
63 E D -0.4100
64 V D 0.0000
65 R D -0.8650
66 S D 0.0000
67 D D -2.3508
68 R D -3.2940
69 D D -2.9653
70 K D -2.0942
71 F D 0.0000
72 V D 0.0000
73 I D 0.0000
74 F D 0.0000
75 L D 0.0000
76 D D -1.1110
77 V D 0.0000
78 K D -2.1259
79 H D -1.7397
80 F D 0.0000
81 S D -1.1986
82 P D 0.0000
83 E D -2.3409
84 D D -2.1590
85 L D 0.0000
86 T D -0.9661
87 V D 0.0000
88 K D -2.1049
89 V D 0.0000
90 Q D -2.9136
91 D D -2.5903
92 D D -1.5525
93 F D -1.6492
94 V D 0.0000
95 E D -1.9232
96 I D 0.0000
97 H D -2.0508
98 G D 0.0000
99 K D -3.7346
100 H D -3.3732
101 N D -3.3901
102 E D -3.3305
103 R D -3.0762
104 Q D -2.8193
105 D D -2.8137
106 D D -2.9448
107 H D -2.0540
108 G D -1.3946
109 Y D -0.7199
110 I D -1.0643
111 S D -2.7740
112 R D -3.7193
113 E D -3.7711
114 F D -2.0550
115 H D -2.1343
116 R D -1.5689
117 R D -2.1723
118 Y D -0.9094
119 R D -0.9612
120 L D 0.0000
121 P D 0.0000
122 S D 0.0000
123 N D 0.0000
124 V D 0.0000
125 D D -0.6507
126 Q D 0.0000
127 S D -1.1459
128 A D -0.4704
129 L D 0.0000
130 S D -0.5649
131 C D 0.0000
132 S D 0.0000
133 L D -1.3300
134 S D -0.9964
135 A D -0.7679
136 D D -1.3620
137 G D -1.2420
138 M D -1.0968
139 L D 0.0000
140 T D 0.0000
141 F D 0.0000
142 C D 0.0000
143 G D 0.0000
144 P D -0.7798
145 K D -0.9016
146 I D 0.3758
147 Q D -0.8484
148 T D -0.9504
149 G D -0.2071
150 L D 0.8674
151 D D -0.0288
152 A D -0.3858
153 T D -0.5858
154 H D -1.1646
155 A D -1.9038
156 E D -3.4248
157 R D -3.0095
158 A D -1.7116
159 I D 0.0000
160 P D -0.5978
161 V D -0.7817
162 S D -1.5227
163 R D -2.8215
164 E D -2.1780
165 E D -2.7962
166 K D -1.9066
167 P D -1.1233
168 T D -0.8053
169 S D -0.8337
170 A D -1.0149
171 P D -0.8929
172 S D -0.4718
173 S D -0.3646
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Laboratory of Theory of Biopolymers 2018