| Chain sequence(s) |
A: MNDPNSCVDNATSGASPESNFNNWFSLWCSTYLTRLLALVMFSMGCNVEIKKFLGHIKRPWGICVGFLCQFGIMPLTGFALSVAFDILPLQAVVVLIIGCCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLLYYTKMWVDSGSIVIPYDNIGTSLISLYCPVSIGMFVNHKWPQKAKIILKIGSIAGAWLWILIAFVGGLLYQSAWCIAPKLWIIGTIFPVAGYSLGFLLARIAGLPWYRCRTVAFETGMQNTQLCSTIVQLSFTPEELNVVFTFPLIYSCGQWAFAALFLGFYVAYKKCHGKNKAEIPESKENGTEPESSFYKANGGFQPDEK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:45)
[INFO] Main: Simulation completed successfully. (00:06:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.0055 | |
| 2 | N | A | -1.7973 | |
| 3 | D | A | -2.4415 | |
| 4 | P | A | -1.4803 | |
| 5 | N | A | -1.9170 | |
| 6 | S | A | -1.5239 | |
| 7 | C | A | -0.1261 | |
| 8 | V | A | 0.4227 | |
| 9 | D | A | -1.8200 | |
| 10 | N | A | -1.8147 | |
| 11 | A | A | -1.0046 | |
| 12 | T | A | -1.0450 | |
| 13 | S | A | -1.0231 | |
| 14 | G | A | -1.1113 | |
| 15 | A | A | -0.6992 | |
| 16 | S | A | -0.9532 | |
| 17 | P | A | -1.5833 | |
| 18 | E | A | -2.4882 | |
| 19 | S | A | -1.4405 | |
| 20 | N | A | -1.1019 | |
| 21 | F | A | 0.9255 | |
| 22 | N | A | -0.5699 | |
| 23 | N | A | -0.2417 | |
| 24 | W | A | 1.7625 | |
| 25 | F | A | 1.5680 | |
| 26 | S | A | 1.2901 | |
| 27 | L | A | 2.3714 | |
| 28 | W | A | 1.9305 | |
| 29 | C | A | 0.0000 | |
| 30 | S | A | 0.9616 | |
| 31 | T | A | 0.6676 | |
| 32 | Y | A | 0.8610 | |
| 33 | L | A | 0.5028 | |
| 34 | T | A | -0.2862 | |
| 35 | R | A | -1.2000 | |
| 36 | L | A | 0.0603 | |
| 37 | L | A | 0.0000 | |
| 38 | A | A | 0.0658 | |
| 39 | L | A | 0.5959 | |
| 40 | V | A | 0.7825 | |
| 41 | M | A | 0.0000 | |
| 42 | F | A | 1.2188 | |
| 43 | S | A | 0.0000 | |
| 44 | M | A | 0.0000 | |
| 45 | G | A | 0.0000 | |
| 46 | C | A | 0.0000 | |
| 47 | N | A | -0.5950 | |
| 48 | V | A | 0.0000 | |
| 49 | E | A | -0.7238 | |
| 50 | I | A | -0.3821 | |
| 51 | K | A | -1.6775 | |
| 52 | K | A | -1.1496 | |
| 53 | F | A | -0.0921 | |
| 54 | L | A | 0.2451 | |
| 55 | G | A | -1.0002 | |
| 56 | H | A | -0.9118 | |
| 57 | I | A | 0.1853 | |
| 58 | K | A | -1.7998 | |
| 59 | R | A | -1.9070 | |
| 60 | P | A | -0.4385 | |
| 61 | W | A | 0.8034 | |
| 62 | G | A | 0.0000 | |
| 63 | I | A | 1.0256 | |
| 64 | C | A | 1.4039 | |
| 65 | V | A | 0.0000 | |
| 66 | G | A | 0.0000 | |
| 67 | F | A | 1.7461 | |
| 68 | L | A | 1.6003 | |
| 69 | C | A | 0.0000 | |
| 70 | Q | A | 0.0000 | |
| 71 | F | A | 0.0000 | |
| 72 | G | A | 0.8522 | |
| 73 | I | A | 0.0000 | |
| 74 | M | A | 0.0000 | |
| 75 | P | A | 0.0000 | |
| 76 | L | A | 1.6031 | |
| 77 | T | A | 1.1040 | |
| 78 | G | A | 0.0000 | |
| 79 | F | A | 1.2735 | |
| 80 | A | A | 0.9802 | |
| 81 | L | A | 0.8616 | |
| 82 | S | A | 0.0000 | |
| 83 | V | A | 0.9384 | |
| 84 | A | A | 0.3912 | |
| 85 | F | A | 0.1071 | |
| 86 | D | A | -0.9764 | |
| 87 | I | A | 0.0000 | |
| 88 | L | A | 1.0895 | |
| 89 | P | A | 0.7948 | |
| 90 | L | A | 0.0000 | |
| 91 | Q | A | 0.2212 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | 0.0000 | |
| 94 | V | A | 0.0000 | |
| 95 | V | A | 0.0000 | |
| 96 | L | A | 0.0000 | |
| 97 | I | A | 0.0000 | |
| 98 | I | A | 0.0000 | |
| 99 | G | A | 0.0000 | |
| 100 | C | A | 0.0000 | |
| 101 | C | A | 0.0000 | |
| 102 | P | A | 0.0000 | |
| 103 | G | A | 0.0000 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | 0.1536 | |
| 106 | A | A | 0.4445 | |
| 107 | S | A | 0.0000 | |
| 108 | N | A | 0.0000 | |
| 109 | I | A | 1.9870 | |
| 110 | L | A | 0.0000 | |
| 111 | A | A | 0.0000 | |
| 112 | Y | A | 1.5232 | |
| 113 | W | A | 1.6933 | |
| 114 | V | A | 0.0000 | |
| 115 | D | A | -0.3852 | |
| 116 | G | A | -0.1810 | |
| 117 | D | A | -0.6700 | |
| 118 | M | A | -0.2714 | |
| 119 | D | A | -1.3416 | |
| 120 | L | A | 0.0000 | |
| 121 | S | A | 0.0000 | |
| 122 | V | A | -0.1484 | |
| 123 | S | A | 0.0000 | |
| 124 | M | A | 0.0000 | |
| 125 | T | A | 0.0000 | |
| 126 | T | A | 0.0000 | |
| 127 | C | A | 0.0000 | |
| 128 | S | A | 0.0000 | |
| 129 | T | A | 0.5387 | |
| 130 | L | A | 0.8516 | |
| 131 | L | A | 1.1218 | |
| 132 | A | A | 0.0000 | |
| 133 | L | A | 1.1784 | |
| 134 | G | A | 0.4592 | |
| 135 | M | A | 0.9210 | |
| 136 | M | A | 0.0000 | |
| 137 | P | A | 1.0634 | |
| 138 | L | A | 2.0437 | |
| 139 | C | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | L | A | 1.5863 | |
| 142 | Y | A | 1.6866 | |
| 143 | Y | A | 0.0000 | |
| 144 | T | A | 0.0000 | |
| 145 | K | A | -0.7206 | |
| 146 | M | A | -0.1267 | |
| 147 | W | A | -0.0061 | |
| 148 | V | A | -0.1106 | |
| 149 | D | A | -1.6618 | |
| 150 | S | A | -1.0993 | |
| 151 | G | A | -0.6111 | |
| 152 | S | A | 0.0990 | |
| 153 | I | A | 0.8713 | |
| 154 | V | A | 1.7752 | |
| 155 | I | A | 0.0000 | |
| 156 | P | A | -0.2466 | |
| 157 | Y | A | -0.4917 | |
| 158 | D | A | -2.0709 | |
| 159 | N | A | -1.3002 | |
| 160 | I | A | 0.0000 | |
| 161 | G | A | -0.4466 | |
| 162 | T | A | -0.0807 | |
| 163 | S | A | 0.0000 | |
| 164 | L | A | 0.0000 | |
| 165 | I | A | 2.1267 | |
| 166 | S | A | 1.0479 | |
| 167 | L | A | 0.0000 | |
| 168 | Y | A | 1.6648 | |
| 169 | C | A | 1.6043 | |
| 170 | P | A | 1.5837 | |
| 171 | V | A | 0.0000 | |
| 172 | S | A | 1.5648 | |
| 173 | I | A | 2.4296 | |
| 174 | G | A | 0.0000 | |
| 175 | M | A | 0.9098 | |
| 176 | F | A | 1.3903 | |
| 177 | V | A | 0.0000 | |
| 178 | N | A | -0.9754 | |
| 179 | H | A | -1.3382 | |
| 180 | K | A | -1.8158 | |
| 181 | W | A | -1.2492 | |
| 182 | P | A | -1.7599 | |
| 183 | Q | A | -2.3366 | |
| 184 | K | A | -2.0950 | |
| 185 | A | A | 0.0000 | |
| 186 | K | A | -2.0571 | |
| 187 | I | A | -0.4404 | |
| 188 | I | A | 0.0446 | |
| 189 | L | A | -0.1190 | |
| 190 | K | A | -0.3627 | |
| 191 | I | A | 1.4652 | |
| 192 | G | A | 0.0000 | |
| 193 | S | A | 1.0972 | |
| 194 | I | A | 2.3336 | |
| 195 | A | A | 1.8643 | |
| 196 | G | A | 1.4021 | |
| 197 | A | A | 1.7385 | |
| 198 | W | A | 2.3987 | |
| 199 | L | A | 0.0000 | |
| 200 | W | A | 2.0733 | |
| 201 | I | A | 3.1673 | |
| 202 | L | A | 2.3904 | |
| 203 | I | A | 0.0000 | |
| 204 | A | A | 2.1719 | |
| 205 | F | A | 3.1781 | |
| 206 | V | A | 2.1019 | |
| 207 | G | A | 0.0000 | |
| 208 | G | A | 1.4389 | |
| 209 | L | A | 1.9667 | |
| 210 | L | A | 1.0821 | |
| 211 | Y | A | 0.3484 | |
| 212 | Q | A | -0.2853 | |
| 213 | S | A | 0.1819 | |
| 214 | A | A | 0.0000 | |
| 215 | W | A | 1.0914 | |
| 216 | C | A | 1.2536 | |
| 217 | I | A | 1.2271 | |
| 218 | A | A | 0.4863 | |
| 219 | P | A | 0.0649 | |
| 220 | K | A | -0.3445 | |
| 221 | L | A | 0.0000 | |
| 222 | W | A | 1.2305 | |
| 223 | I | A | 1.4562 | |
| 224 | I | A | 0.0000 | |
| 225 | G | A | 0.0000 | |
| 226 | T | A | 1.0158 | |
| 227 | I | A | 1.1548 | |
| 228 | F | A | 0.0000 | |
| 229 | P | A | 0.0000 | |
| 230 | V | A | 0.7221 | |
| 231 | A | A | 0.4809 | |
| 232 | G | A | 0.0000 | |
| 233 | Y | A | 0.0000 | |
| 234 | S | A | 0.7190 | |
| 235 | L | A | 1.0618 | |
| 236 | G | A | 0.0000 | |
| 237 | F | A | 1.2608 | |
| 238 | L | A | 1.7943 | |
| 239 | L | A | 1.5025 | |
| 240 | A | A | 0.0000 | |
| 241 | R | A | 0.2766 | |
| 242 | I | A | 1.7223 | |
| 243 | A | A | 0.7792 | |
| 244 | G | A | -0.0436 | |
| 245 | L | A | 0.0000 | |
| 246 | P | A | -0.0764 | |
| 247 | W | A | 0.3717 | |
| 248 | Y | A | 0.1667 | |
| 249 | R | A | -0.5005 | |
| 250 | C | A | 0.0000 | |
| 251 | R | A | 0.0477 | |
| 252 | T | A | 0.0000 | |
| 253 | V | A | 0.0000 | |
| 254 | A | A | 0.0000 | |
| 255 | F | A | 0.0000 | |
| 256 | E | A | 0.0000 | |
| 257 | T | A | 0.0000 | |
| 258 | G | A | 0.0000 | |
| 259 | M | A | 0.0000 | |
| 260 | Q | A | 0.0000 | |
| 261 | N | A | -0.2076 | |
| 262 | T | A | 0.0000 | |
| 263 | Q | A | -0.2177 | |
| 264 | L | A | 0.0000 | |
| 265 | C | A | 0.0000 | |
| 266 | S | A | 0.0000 | |
| 267 | T | A | 0.0000 | |
| 268 | I | A | 0.0000 | |
| 269 | V | A | 0.0000 | |
| 270 | Q | A | -0.1279 | |
| 271 | L | A | 0.1779 | |
| 272 | S | A | 0.0000 | |
| 273 | F | A | 0.0000 | |
| 274 | T | A | -0.9178 | |
| 275 | P | A | -1.1566 | |
| 276 | E | A | -2.0883 | |
| 277 | E | A | -1.2750 | |
| 278 | L | A | 0.0000 | |
| 279 | N | A | -0.3883 | |
| 280 | V | A | 0.8625 | |
| 281 | V | A | 0.0000 | |
| 282 | F | A | 0.0000 | |
| 283 | T | A | 0.0000 | |
| 284 | F | A | 0.0000 | |
| 285 | P | A | 0.0000 | |
| 286 | L | A | 0.3282 | |
| 287 | I | A | 0.0000 | |
| 288 | Y | A | 0.0000 | |
| 289 | S | A | 0.0000 | |
| 290 | C | A | 1.0433 | |
| 291 | G | A | 1.0577 | |
| 292 | Q | A | 0.0000 | |
| 293 | W | A | 1.2626 | |
| 294 | A | A | 1.1187 | |
| 295 | F | A | 1.3369 | |
| 296 | A | A | 0.0000 | |
| 297 | A | A | 1.2025 | |
| 298 | L | A | 1.8276 | |
| 299 | F | A | 1.9680 | |
| 300 | L | A | 1.8380 | |
| 301 | G | A | 1.6170 | |
| 302 | F | A | 2.5756 | |
| 303 | Y | A | 1.6152 | |
| 304 | V | A | 1.2206 | |
| 305 | A | A | 0.8058 | |
| 306 | Y | A | 0.9086 | |
| 307 | K | A | -1.6205 | |
| 308 | K | A | -1.7844 | |
| 309 | C | A | -0.7055 | |
| 310 | H | A | -1.9727 | |
| 311 | G | A | -2.7694 | |
| 312 | K | A | -3.8089 | |
| 313 | N | A | -3.2988 | |
| 314 | K | A | -2.8801 | |
| 315 | A | A | -1.4942 | |
| 316 | E | A | -0.9393 | |
| 317 | I | A | 0.4181 | |
| 318 | P | A | -0.8783 | |
| 319 | E | A | -2.5913 | |
| 320 | S | A | -2.4081 | |
| 321 | K | A | -3.6551 | |
| 322 | E | A | -3.7191 | |
| 323 | N | A | -2.8708 | |
| 324 | G | A | -2.1812 | |
| 325 | T | A | -1.9772 | |
| 326 | E | A | -2.5494 | |
| 327 | P | A | -2.1628 | |
| 328 | E | A | -2.2812 | |
| 329 | S | A | -0.7582 | |
| 330 | S | A | -0.3090 | |
| 331 | F | A | 1.5756 | |
| 332 | Y | A | 1.0547 | |
| 333 | K | A | -0.9725 | |
| 334 | A | A | -0.5791 | |
| 335 | N | A | -0.9880 | |
| 336 | G | A | -1.1485 | |
| 337 | G | A | -0.1641 | |
| 338 | F | A | 0.7253 | |
| 339 | Q | A | -1.2226 | |
| 340 | P | A | -1.6923 | |
| 341 | D | A | -3.2756 | |
| 342 | E | A | -3.7418 | |
| 343 | K | A | -3.0707 |